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BaseInfo

ncRNA ID osa-miRf10396-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CGCGCUUUGAGUGAGCGAGA - NA
Stem-loop(if miRNA) U    -  G      A  - GG           G  AAG   -     GAC    - UAAAGCGAUACCGUGG
 GCAU CG UCUCGC UC C  AAAGCGCGAGA CG   CGG UCUCG   UGUC G                G
 |||| || |||||| || |  ||||||||||| ||   ||| |||||   |||| |                C
 CGUG GU AGAGCG AG G  UUUCGCGCUCU GU   GCC GGGGC   GCAC C                C
G    C  G      -  U AG           G  GAA   C     ---    G AGUCUGUCAUAGUCAG
Stem-loop sequence UGCAUCGGUCUCGCAUCCGGAAAGCGCGAGAGCGAAGCGGUCUCGGACUGUCGUAAAGCGAUACCGUGGGCCGACUGAUACUGUCUGACGCACGCGGGGCCCGAAGUGGUCUCGCGCUUUGAGUGAGCGAGAGUGCGUGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK110070.1
ncRNA:20   AGAGCGAGUGAGUUUCGCGC   1
  **||||*||||||||||||*
targets:172   GAUCGCCCACUCAAAGCGCA   191

3.0 Oryza sativa Japonica Group cDNA clone:002-160-E10, full insert sequence NA coding protein psRNATarget