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BaseInfo

ncRNA ID novel_zma_miR7960
Species Zea mays
Class miRNA
Genome position Chr7:73382965-73383003 [-]
Reference genome RefGen_v4
Source SRR3385575;SRR3385651
Length 19
Mature sequence(if miRNA) 1 - UCAUGUCGUCAUGGACGCC - 19
Stem-loop(if miRNA) --  C   -  -       A
  CG CCA GG GGCAUGA A
  || ||| || ||||||| A
  GC GGU CU CUGUACU U
CC  A   A  G       A
Stem-loop sequence CGCCCAGGGGCAUGAAAAUAUCAUGUCGUCAUGGACGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT083919.1
ncRNA:19   CCGCAGGUACUGCUGUACU   1
  *||||=||||||||||||*
targets:113   CGCGUUCAUGACGACAUGC   131

3.0 Zea mays full-length cDNA clone ZM_BFb0054H04 mRNA, complete cds NA coding protein psRNATarget
GQ925914.1
ncRNA:19   CCGCAGGUACUGCUGUACU   1
  *||||=||||||||||||*
targets:1579   CGCGUUCAUGACGACAUGC   1597

3.0 Zea mays NADP-dependent malic enzyme mRNA, complete cds NA coding protein psRNATarget
BT055901.1
ncRNA:19   CCGCAGGUACUGCUGUACU   1
  *||||=||||||||||||*
targets:1636   CGCGUUCAUGACGACAUGC   1654

3.0 Zea mays full-length cDNA clone ZM_BFc0026K19 mRNA, complete cds NA coding protein psRNATarget
AY104511.1
ncRNA:19   CCGCAGGUACUGCUGUACU   1
  *||||=||||||||||||*
targets:1821   CGCGUUCAUGACGACAUGC   1839

3.0 Zea mays PCO117256 mRNA sequence NA coding protein psRNATarget