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BaseInfo

ncRNA ID	novel_zma_miR7959
Species	Zea mays
Class	miRNA
Genome position	Chr7:115501603-115501649 [-]
Reference genome	RefGen_v4
Source	SRR3385575
Length	22
Mature sequence(if miRNA)	26 - GAUCUGGUCUGCGUUACUGCGU - 47
Stem-loop(if miRNA)	--       -U UG   U     G   GAUCUGG  C  CGU ACUGC U   |||||||  |  ||| |||||   CUAGACC  G  GCA UGAUG A UU       UC GU   C     U
Stem-loop sequence	GAUCUGGUCUGCGUUACUGCGUAUGUAGUCACGUGGCUCCAGAUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550037.1	ncRNA:22   UGCGUCAUUGCGUCUGGUCUAG   1   *|**||*||||||||||||||| targets:714   UCAGAGAAACGCAGACCAGAUC   735 Target Full Sequence	2.0	PREDICTED: Zea mays calcium permeable stress-gated cation channel 1-like (LOC103651635), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020550035.1	ncRNA:22   UGCGUCAUUGCGUCUGGUCUAG   1   *|**||*||||||||||||||| targets:721   UCAGAGAAACGCAGACCAGAUC   742 Target Full Sequence	2.0	PREDICTED: Zea mays calcium permeable stress-gated cation channel 1-like (LOC103651635), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020550036.1	ncRNA:22   UGCGUCAUUGCGUCUGGUCUAG   1   *|**||*||||||||||||||| targets:810   UCAGAGAAACGCAGACCAGAUC   831 Target Full Sequence	2.0	PREDICTED: Zea mays calcium permeable stress-gated cation channel 1-like (LOC103651635), transcript variant X3, mRNA	NA	coding protein	psRNATarget
NM_001346825.1	ncRNA:22   UGCGUCAUUGCGUCUGGUCUAG   1   *|**||*||||||||||||||| targets:831   UCAGAGAAACGCAGACCAGAUC   852 Target Full Sequence	2.0	Zea mays calcium permeable stress-gated cation channel 1-like (LOC103651635), mRNA	NA	coding protein	psRNATarget
XM_008677308.2	ncRNA:22   UGCGUCAUUGCGUCUGGUCUAG   1   *|**||*||||||||||||||| targets:1182   UCAGAGAAACGCAGACCAGAUC   1203 Target Full Sequence	2.0	PREDICTED: Zea mays calcium permeable stress-gated cation channel 1-like (LOC103651635), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546180.1	ncRNA:22   UGCGUCAUUGCGUCUGGUCUAG   1   *|**||*||||||||||||||| targets:4959   UCAGAGAAACGCAGACCAGAUC   4980 Target Full Sequence	2.0	PREDICTED: Zea mays calcium permeable stress-gated cation channel 1-like (LOC103649511), transcript variant X2, mRNA	NA	coding protein	psRNATarget