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BaseInfo

ncRNA ID novel_zma_miR7958
Species Zea mays
Class miRNA
Genome position Chr7:134001637-134001725 [-]
Reference genome RefGen_v4
Source SRR3385575
Length 22
Mature sequence(if miRNA) 68 - AGUACGAACCAGAGCCAGGAUA - 89
Stem-loop(if miRNA) --     G    A       -   -----AGAGG     -  C    G
  AGUAC AACC GAGCCAG GAU          AAUGC AG GUUU A
  ||||| |||| ||||||| |||          ||||| || |||| U
  UCGUG UUGG UUUGGUC CUA          UUGUG UC CAAG A
AG     -    G       U   GAUGUGAAAA     G  A    A
Stem-loop sequence AGUACGAACCAGAGCCAGGAUAGAGGAAUGCAGCGUUUGAUAAGAACACUGGUGUUAAAAGUGUAGAUCUCUGGUUUGGGUUGUGCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ100663.1
ncRNA:22   AUAGGACCGAGACCAAGCAUGA   1
  ||||||||||||||||||||||
targets:114   UAUCCUGGCUCUGGUUCGUACU   135

0.0 TSA: Zea mays contig36319, mRNA sequence NA coding protein psRNATarget