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BaseInfo

ncRNA ID novel_zma_miR7954
Species Zea mays
Class miRNA
Genome position Chr7:177704584-177704644 [+]
Reference genome RefGen_v4
Source SRR3385575
Length 21
Mature sequence(if miRNA) 1 - UUCAGAUGUAGGCAUUCCUCU - 21
Stem-loop(if miRNA) --U       UAG            CA  UA
   UCAGAUG   GCAUUCCUCUUG  UG  A
   |||||||   ||||||||||||  ||  U
   AGUUUAC   UGUGAGGGGAGC  AC  A
UUC       UAG            --  UU
Stem-loop sequence UUCAGAUGUAGGCAUUCCUCUUGCAUGUAAUAUUCACGAGGGGAGUGUGAUCAUUUGACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ109672.1
ncRNA:21   UCUCCUUACGGAUGUAGACUU   1
  |||||||||||||||||||||
targets:141   AGAGGAAUGCCUACAUCUGAA   161

0.0 TSA: Zea mays contig45331, mRNA sequence NA coding protein psRNATarget