ncRNA ID | novel_zma_miR7942 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:28068865-28068929 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385575 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CGCGAGCUCUGCACCCUACG - 20 |
Stem-loop(if miRNA) |
--C          -  C   A   U   G  - A    GCGAGCUCUG CA CCU CGU UCG GC C G    |||||||||| || ||| ||| ||| || |    CGCUCGAGGC GU GGA GCA GGC CG G C GCC          U  C   -   C   G  U A |
Stem-loop sequence | CGCGAGCUCUGCACCCUACGUUUCGGGCCAGCAGUGCGCGGCACGAGGCUGUCGGAGCUCGCCCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008679933.2 |
|
3.0 | PREDICTED: Zea mays long chain base biosynthesis protein 2a (LOC103652945), transcript variant X3, mRNA | NA | coding protein | psRNATarget |