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BaseInfo

ncRNA ID osa-miRf10391-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CUAUUUUUGCAUGCGGGUGGC - NA
Stem-loop(if miRNA) AUUGC         A           ----  A              U
     UAUUUUUGC UGCGGGUGGCG    CA CCGCACGCGAAAAU U
     ||||||||| |||||||||||    || ||||||||||||||
     AUAAAAACG AUGCCCGCUGC    GU GGCGUGCGCUUUUA U
UAAAA         C           AUUA  G              G
Stem-loop sequence AUUGCUAUUUUUGCAUGCGGGUGGCGCAACCGCACGCGAAAAUUUUGAUUUUCGCGUGCGGGUGAUUACGUCGCCCGUACGCAAAAAUAAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK064746.1
ncRNA:21   CGGUGGGCGUACGUUUUUAUC   1
  |||||||||||||||||||**
targets:532   GCCACCCGCAUGCAAAAAUCA   552

2.5 Oryza sativa Japonica Group cDNA clone:002-120-E06, full insert sequence NA coding protein psRNATarget
AK288232.1
ncRNA:21   CGGUGGGCGUACGUUUUUAUC   1
  *|||||||||||*||||||||
targets:2723   ACCACCCGCAUGGAAAAAUAG   2743

1.5 Oryza sativa Japonica Group cDNA, clone: J090012P03, full insert sequence NA coding protein psRNATarget
AK070750.1
ncRNA:21   CGGUGGGCGUACGUUUUUAUC   1
  *|=||||||||||||||||*|
targets:628   UCUACCCGCAUGCAAAAAUCG   648

2.5 Oryza sativa Japonica Group cDNA clone:J023067A07, full insert sequence NA coding protein psRNATarget
AK106655.1
ncRNA:21   CGGUGGGCGUACGUUUUUAUC   1
  **||*||||||||=|||||||
targets:234   AGCAACCGCAUGCGAAAAUAG   254

2.5 Oryza sativa Japonica Group cDNA clone:002-113-G04, full insert sequence NA coding protein psRNATarget
AK109584.1
ncRNA:21   CGGUGGGCGUACGUUUUUAUC   1
  **||*||||||||=|||||||
targets:200   AGCAACCGCAUGCGAAAAUAG   220

2.5 Oryza sativa Japonica Group cDNA clone:002-137-A10, full insert sequence NA coding protein psRNATarget