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BaseInfo

ncRNA ID novel_zma_miR7935
Species Zea mays
Class miRNA
Genome position Chr6:166086737-166086835 [-]
Reference genome RefGen_v4
Source SRR3385575
Length 24
Mature sequence(if miRNA) 76 - CAUGUCACAUCAAAUGUCUGAAUA - 99
Stem-loop(if miRNA) --C      C   A     C    UAUC  U       GUUUUAUA      A
   AUGUCA AUC AAUGU UGAA    UG AUAAUUA        GUUGAA U
   |||||| ||| ||||| ||||    || |||||||        |||||| A
   UACAGU UAG UUACA ACUU    AC UAUUAAU        UAAUUU U
AGA      A   C     A    ----  -       ---ACUCA      A
Stem-loop sequence CAUGUCACAUCAAAUGUCUGAAUAUCUGUAUAAUUAGUUUUAUAGUUGAAAUAUAUUUAAUACUCAUAAUUAUCAUUCAAACAUUCGAUAUGACAUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ061929.1
ncRNA:24   AUAAGUCUGUAAACUACACUGUAC   1
  *||*||||||*|||||||*|||||
targets:376   CAUACAGACAGUUGAUGUAACAUG   399

2.5 TSA: Zea mays contig63051, mRNA sequence NA coding protein psRNATarget