ncRNA ID | novel_zma_miR7933 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:170619896-170619975 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385575 |
Length | 20 |
Mature sequence(if miRNA) | 61 - CUCACUAUACAUAUCUGGUU - 80 |
Stem-loop(if miRNA) |
--  CC     C     C    ----U  UU           U   CC  AUAUG UAUAG UGAG     GU  GGUGGCUUCAG U   ||  ||||| ||||| ||||     ||  ||||||||||| C   GG  UAUAC AUAUC ACUC     CG  UUAUUGAGGUU U UU  UC     -     -    CUUGU  -U           G |
Stem-loop sequence | CCCCAUAUGCUAUAGCUGAGUGUUUGGUGGCUUCAGUUCUGUUGGAGUUAUUUGCUGUUCCUCACUAUACAUAUCUGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY111274.1 |
|
0.0 | Zea mays CL15198_1 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ060187.1 |
|
3.0 | TSA: Zea mays contig61309, mRNA sequence | NA | coding protein | psRNATarget |