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BaseInfo

ncRNA ID novel_zma_miR7931
Species Zea mays
Class miRNA
Genome position Chr6:145422683-145422759 [+]
Reference genome RefGen_v4
Source SRR3385575
Length 23
Mature sequence(if miRNA) 1 - AAUUUCGGGUCGGGCUUUUCGGG - 23
Stem-loop(if miRNA) --          -    CUU        UUUAAUAUUUC     UC
  AAUUUCGGGU CGGG   UUCGGGUU           GGGUU  C
  |||||||||| ||||   ||||||||           |||||
  UUAAAGCCCA GCUC   AAGCCCAA           CUCGA  A
CU          A    ---        -----------     CG
Stem-loop sequence AAUUUCGGGUCGGGCUUUUCGGGUUUUUAAUAUUUCGGGUUUCCAGCAGCUCAACCCGAACUCGAACCCGAAAUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU944440.1
ncRNA:23   GGGCUUUUCGGGCUGGGCUUUAA   1
  |||*||||*||||||||||||||
targets:633   CCCAAAAAACCCGACCCGAAAUU   655

1.0 Zea mays clone 218592 mRNA sequence NA coding protein psRNATarget
NM_001154449.1
ncRNA:23   GGGCUUUUCGGGCUGGGCUUUAA   1
  |||*||||*||||||||||||||
targets:908   CCCAAAAAACCCGACCCGAAAUU   930

1.0 Zea mays glyoxalase/bleomycin resistance protein/dioxygenase (LOC100281531), mRNA NA coding protein psRNATarget
EU957014.1
ncRNA:23   GGGCUUUUCGGGCUGGGCUUUAA   1
  |||*||||*||||||||||||||
targets:908   CCCAAAAAACCCGACCCGAAAUU   930

1.0 Zea mays clone 1580507 glyoxalase/bleomycin resistance protein/dioxygenase mRNA, complete cds NA coding protein psRNATarget