ncRNA ID | novel_zma_miR7930 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:9551871-9551956 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385575 |
Length | 19 |
Mature sequence(if miRNA) | 68 - GCGUGCAUGGUGCCAAGCA - 86 |
Stem-loop(if miRNA) |
--CC    U  C         CU     A    AACGACAGCU     UGGC CC UGUAUGCCA  CAUCU GAGC          U     |||| || |||||||||  ||||| ||||     ACCG GG ACGUGCGGU  GUAGA UAUC          G ACGA    U  U         AG     A    CGUUGGGAUG |
Stem-loop sequence | CCUGGCUCCCUGUAUGCCACUCAUCUAGAGCAACGACAGCUUGGUAGGGUUGCCUAUAAGAUGGAUGGCGUGCAUGGUGCCAAGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008646281.2 |
|
2.5 | PREDICTED: Zea mays lysosomal beta glucosidase-like (LOC103625882), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008646279.2 |
|
2.5 | PREDICTED: Zea mays lysosomal beta glucosidase-like (LOC103625882), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001346595.1 |
|
2.5 | Zea mays lysosomal beta glucosidase-like (LOC103625882), mRNA | NA | coding protein | psRNATarget |