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BaseInfo

ncRNA ID novel_zma_miR7930
Species Zea mays
Class miRNA
Genome position Chr6:9551871-9551956 [+]
Reference genome RefGen_v4
Source SRR3385575
Length 19
Mature sequence(if miRNA) 68 - GCGUGCAUGGUGCCAAGCA - 86
Stem-loop(if miRNA) --CC    U  C         CU     A    AACGACAGCU
    UGGC CC UGUAUGCCA  CAUCU GAGC          U
    |||| || |||||||||  ||||| ||||
    ACCG GG ACGUGCGGU  GUAGA UAUC          G
ACGA    U  U         AG     A    CGUUGGGAUG
Stem-loop sequence CCUGGCUCCCUGUAUGCCACUCAUCUAGAGCAACGACAGCUUGGUAGGGUUGCCUAUAAGAUGGAUGGCGUGCAUGGUGCCAAGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008646281.2
ncRNA:19   ACGAACCGUGGUACGUGCG   1
  |*|||||||||=|||||||
targets:1744   UCCUUGGCACCGUGCACGC   1762

2.5 PREDICTED: Zea mays lysosomal beta glucosidase-like (LOC103625882), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008646279.2
ncRNA:19   ACGAACCGUGGUACGUGCG   1
  |*|||||||||=|||||||
targets:1846   UCCUUGGCACCGUGCACGC   1864

2.5 PREDICTED: Zea mays lysosomal beta glucosidase-like (LOC103625882), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001346595.1
ncRNA:19   ACGAACCGUGGUACGUGCG   1
  |*|||||||||=|||||||
targets:2069   UCCUUGGCACCGUGCACGC   2087

2.5 Zea mays lysosomal beta glucosidase-like (LOC103625882), mRNA NA coding protein psRNATarget