Search result

BaseInfo

ncRNA ID novel_zma_miR7923
Species Zea mays
Class miRNA
Genome position Chr5:185976287-185976339 [-]
Reference genome RefGen_v4
Source SRR3385575;SRR3385660
Length 21
Mature sequence(if miRNA) 33 - GUUGCUAGGCUCGGCCGUGUA - 53
Stem-loop(if miRNA) --      A   U    C    AGAGC
  GUUGCU GGC CGGC GUGU     A
  |||||| ||| |||| ||||
  CAACGA CCG GCCG CACG     G
AA      A   C    -    AGAAC
Stem-loop sequence GUUGCUAGGCUCGGCCGUGUAGAGCAGCAAGAGCACGCCGCGCCAAGCAACAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020548870.1
ncRNA:21   AUGUGCCGGCUCGGAUCGUUG   1
  *=||||||||||||*|||||*
targets:604   GGCACGGCCGAGCCAAGCAAG   624

2.5 PREDICTED: Zea mays spidroin-1-like (LOC109944189), mRNA NA coding protein psRNATarget
EU971148.1
ncRNA:21   AUGUGCCGGCUCGGAUCGUUG   1
  |*|||*|=||||||||||||=
targets:758   UCCACCGUCGAGCCUAGCAAU   778

3.0 Zea mays clone 358430 transmembrane emp24 domain-containing protein 10 precursor, mRNA, complete cds NA coding protein psRNATarget
NM_001158075.1
ncRNA:21   AUGUGCCGGCUCGGAUCGUUG   1
  |*|||*|=||||||||||||=
targets:758   UCCACCGUCGAGCCUAGCAAU   778

3.0 Zea mays uncharacterized LOC100285181 (cl15300_1), mRNA NA coding protein psRNATarget