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BaseInfo

ncRNA ID	novel_zma_miR7918
Species	Zea mays
Class	miRNA
Genome position	Chr5:14036246-14036396 [+]
Reference genome	RefGen_v4
Source	SRR3385575;SRR3385651
Length	21
Mature sequence(if miRNA)	1 - CCUAGUCGGCCGACUAAUCGC - 21
Stem-loop(if miRNA)	--CCU     G                      UGACUAGGAU         UAA   A      CUAAUC    -  UCCA      AGUCG CCGACUAAUCGCGAUUAGUCGC          GAUUAGUCG   CCU GUCGCC      GAGU CG    U      ||||| ||||||||||||||||||||||          |||||||||   ||| ||||||      |||| ||    G      UCAGC GGCUGAUUAGCGCUGAUCAGCG          CUAAUCAGU   GGA UAGCGG      CUCG GC    C AAAUU     A                      ----------         --C   A      -ACCAU    U  UAAU
Stem-loop sequence	CCUAGUCGGCCGACUAAUCGCGAUUAGUCGCUGACUAGGAUGAUUAGUCGUAACCUAGUCGCCCUAAUCGAGUCGUCCAUGCUAAUCGUGCUCUACCAGGCGAUAAGGCUGACUAAUCGCGACUAGUCGCGAUUAGUCGGACGACUUUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550128.1	ncRNA:21   CGCUAAUCAGCCGGCUGAUCC   1   ||||||||||||*|||||||| targets:265   GCGAUUAGUCGGACGACUAGG   285 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103649795 (LOC103649795), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020551348.1	ncRNA:21   CGCUAAUCAGCCGGCUGAUCC   1   ||||||||||||*|||||||| targets:1873   GCGAUUAGUCGGACGACUAGG   1893 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100272605), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_008678532.2	ncRNA:21   CGCUAAUCAGCCGGCUGAUCC   1   ||||||||||||*|||||||| targets:2175   GCGAUUAGUCGGACGACUAGG   2195 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100272605), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_008678531.2	ncRNA:21   CGCUAAUCAGCCGGCUGAUCC   1   ||||||||||||*|||||||| targets:2191   GCGAUUAGUCGGACGACUAGG   2211 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100272605), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008678530.2	ncRNA:21   CGCUAAUCAGCCGGCUGAUCC   1   ||||||||||||*|||||||| targets:2229   GCGAUUAGUCGGACGACUAGG   2249 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100272605), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008678529.2	ncRNA:21   CGCUAAUCAGCCGGCUGAUCC   1   ||||||||||||*|||||||| targets:2235   GCGAUUAGUCGGACGACUAGG   2255 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100272605), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008677323.2	ncRNA:21   CGCUAAUCAGCCGGCUGAUCC   1   |||||||||||*||||||||| targets:632   GCGAUUAGUCGUCCGACUAGG   652 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103651643 (LOC103651643), mRNA	NA	coding protein	psRNATarget
XM_020546477.1	ncRNA:21   CGCUAAUCAGCCGGCUGAUCC   1   *|||||||||||||||=|||* targets:6164   CCGAUUAGUCGGCCGAUUAGU   6184 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103638694 (LOC103638694), mRNA	NA	coding protein	psRNATarget
XM_008661249.2	ncRNA:21   CGCUAAUCAGCCGGCUGAUCC   1   |||||||||||*||||||||* targets:665   GCGAUUAGUCGUCCGACUAGA   685 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103638297 (LOC103638297), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008662044.2	ncRNA:21   CGCUAAUCAGCCGGCUGAUCC   1   ||||*|||||||*|||||||| targets:6936   GCGACUAGUCGGACGACUAGG   6956 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103639282 (LOC103639282), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546483.1	ncRNA:21   CGCUAAUCAGCCGGCUGAUCC   1   ||||*|||||||*|||||||| targets:6936   GCGACUAGUCGGACGACUAGG   6956 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103639282 (LOC103639282), transcript variant X1, mRNA	NA	coding protein	psRNATarget