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BaseInfo

ncRNA ID	novel_zma_miR7913
Species	Zea mays
Class	miRNA
Genome position	Chr5:32774391-32774438 [-]
Reference genome	RefGen_v4
Source	SRR3385575
Length	23
Mature sequence(if miRNA)	26 - AGCGGAGCGGAGAGGAGGGCCCU - 48
Stem-loop(if miRNA)	--A              AG   CC    GCGGAGCGGAGAGG  GGC  U    ||||||||||||||  |||    CGUUUCGCCUCUUU  UCG  U GAA              GU   UC
Stem-loop sequence	AGCGGAGCGGAGAGGAGGGCCCUUCUGCUUGUUUCUCCGCUUUGCAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001346825.1	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   |||*||||||*|||||||||||| targets:160   AGGCCCCUCCGCUCCGCUCCGCU   182 Target Full Sequence	1.5	Zea mays calcium permeable stress-gated cation channel 1-like (LOC103651635), mRNA	NA	coding protein	psRNATarget
XM_008677308.2	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   |||*||||||*|||||||||||| targets:511   AGGCCCCUCCGCUCCGCUCCGCU   533 Target Full Sequence	1.5	PREDICTED: Zea mays calcium permeable stress-gated cation channel 1-like (LOC103651635), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020548595.1	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   |*|||||||||||||||*||||* targets:407   AUGGCCCUCCUCUCCGCGCCGCG   429 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109944082 (LOC109944082), mRNA	NA	coding protein	psRNATarget
EU968934.1	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   |**|||||||||||||||||*|| targets:26   ACCGCCCUCCUCUCCGCUCCCCU   48 Target Full Sequence	1.5	Zea mays clone 325075 erwinia induced protein 2 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157476.1	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   |**|||||||||||||||||*|| targets:26   ACCGCCCUCCUCUCCGCUCCCCU   48 Target Full Sequence	1.5	Zea mays uncharacterized LOC100284581 (IDP3821), mRNA	NA	coding protein	psRNATarget
EU959361.1	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   ****=||||||||||||||||=| targets:29   UCCUUCCUCCUCUCCGCUCCGUU   51 Target Full Sequence	2.5	Zea mays clone 217678 UDP-N-acetylglucosamine transferase subunit alg13 mRNA, complete cds	NA	coding protein	psRNATarget
EU958845.1	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   ****=||||||||||||||||=| targets:59   UCCUUCCUCCUCUCCGCUCCGUU   81 Target Full Sequence	2.5	Zea mays clone 208064 UDP-N-acetylglucosamine transferase subunit alg13 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143623.2	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   ****=||||||||||||||||=| targets:6   UCCUUCCUCCUCUCCGCUCCGUU   28 Target Full Sequence	2.5	Zea mays UDP-N-acetylglucosamine transferase subunit alg13 (LOC100217271), mRNA	NA	coding protein	psRNATarget
BT038253.1	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   ****=||||||||||||||||=| targets:6   UCCUUCCUCCUCUCCGCUCCGUU   28 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0221F11 mRNA, complete cds	NA	coding protein	psRNATarget
EU944532.1	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   |***||*|||||||||||||||| targets:82   ACCACCAUCCUCUCCGCUCCGCU   104 Target Full Sequence	1.0	Zea mays clone 221624 mRNA sequence	NA	coding protein	psRNATarget
BT034904.1	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   ***|||||||||*|||||||||* targets:330   CCCGCCCUCCUCGCCGCUCCGCC   352 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0027B22 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138010.2	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   ***|||||||||*|||||||||* targets:392   CCCGCCCUCCUCGCCGCUCCGCC   414 Target Full Sequence	2.5	Zea mays putative beta-14-xylosyltransferase IRX9H (LOC100192819), mRNA	NA	coding protein	psRNATarget
BT067856.1	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   ***|||||||||*|||||||||* targets:331   CCCGCCCUCCUCGCCGCUCCGCC   353 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0169K17 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176271.1	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   ***|||||||||*|||||||||* targets:331   CCCGCCCUCCUCGCCGCUCCGCC   353 Target Full Sequence	2.5	Zea mays putative beta-14-xylosyltransferase IRX9H (LOC100383623), mRNA	NA	coding protein	psRNATarget
XM_008663988.2	ncRNA:23   UCCCGGGAGGAGAGGCGAGGCGA   1   ***|||||||||*|||||||||* targets:462   CCCGCCCUCCUCGCCGCUCCGCC   484 Target Full Sequence	2.5	PREDICTED: Zea mays putative beta-14-xylosyltransferase IRX9H (LOC100383623), transcript variant X1, mRNA	NA	coding protein	psRNATarget