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BaseInfo

ncRNA ID	novel_zma_miR7907
Species	Zea mays
Class	miRNA
Genome position	Chr4:186240103-186240203 [-]
Reference genome	RefGen_v4
Source	SRR3385575
Length	19
Mature sequence(if miRNA)	83 - GGCAAACAGUUUGUUGGCU - 101
Stem-loop(if miRNA)	--     A        UG   AAAUUUAGUAC   A    CCA   A   UG   A   GGCAA CAGUUUGU  GCU           CUU GGCU   AAU AGC  GCU A   ||||| ||||||||  |||           ||| ||||   ||| |||  |||   CCGUU GUCAAACA  CGA           GAG CCGA   UUA UCG  UGA U AU     A        GU   -----------   G    UUG   A   GU   A
Stem-loop sequence	GGCAAACAGUUUGUUGGCUAAAUUUAGUACCUUAGGCUCCAAAUAAGCUGGCUAAUAAGUUGGCUAAUUGUUAGCCGGAGAGCUGACAAACUGAUUGCCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008668285.2	ncRNA:19   UCG-GUUGUUUGACAAACGG   1   |||-|||||||||||||||| targets:1061   AGCUCAACAAACUGUUUGCC   1080 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103645179 (LOC103645179), mRNA	NA	coding protein	psRNATarget
XM_020544318.1	ncRNA:19   UCG-GUUGUUUGACAAACGG   1   |||-|||||||||||||||| targets:1186   AGCUCAACAAACUGUUUGCC   1205 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103637878 (LOC103637878), mRNA	NA	coding protein	psRNATarget
EZ096284.1	ncRNA:19   UCGGUUGUUUGACAAACGG   1   ||||||||||||*|||||* targets:7   AGCCAACAAACUUUUUGCA   25 Target Full Sequence	2.5	TSA: Zea mays contig31938, mRNA sequence	NA	coding protein	psRNATarget
GU228589.1	ncRNA:19   UCGGUUGUUUGACAAACGG   1   ||||||||||||*|||||* targets:564   AGCCAACAAACUUUUUGCA   582 Target Full Sequence	2.5	Zea mays cultivar 18-599 trehalose-6-phosphate synthase-like (TPS6) mRNA, complete sequence	NA	coding protein	psRNATarget
XM_008666475.2	ncRNA:19   UCGGUUGUUUGACAAACGG   1   ||||||||||||*|||||* targets:864   AGCCAACAAACUUUUUGCA   882 Target Full Sequence	2.5	PREDICTED: Zea mays probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 (LOC103643324), mRNA	NA	coding protein	psRNATarget
XM_008680333.2	ncRNA:19   UCGGUUGUUUGACAAACGG   1   ||||||||||||*|||||* targets:986   AGCCAACAAACUUUUUGCA   1004 Target Full Sequence	2.5	PREDICTED: Zea mays probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 (LOC103653427), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020552563.1	ncRNA:19   UCGGUUGUUUGACAAACGG   1   ||||||||||||*|||||* targets:1078   AGCCAACAAACUUUUUGCA   1096 Target Full Sequence	2.5	PREDICTED: Zea mays probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 (LOC103653427), transcript variant X2, mRNA	NA	coding protein	psRNATarget