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BaseInfo

ncRNA ID	novel_zma_miR7901
Species	Zea mays
Class	miRNA
Genome position	Chr4:235108353-235108500 [-]
Reference genome	RefGen_v4
Source	SRR3385575
Length	19
Mature sequence(if miRNA)	1 - CGCCCGAUCUCGCGCUGCC - 19
Stem-loop(if miRNA)	--    -        C U   C   ACCCUA GCACCAGAUCACAGGUACUGGGAGCUCCGCCACCAUAAGUAGAUG   CGGC UGAGAUCG G GCG GCA      G                                             G   |||| |||||||| | ||| |||      |                                             C   GUCG GCUCUAGC C CGC CGU      C                                             U CC    C        - -   U   ----CG UUUGUCCACUCUCGUCUUCGUCUCAUCGUUUUUGUUGGGAUUGCC
Stem-loop sequence	CGGCUGAGAUCGCGUGCGCGCAACCCUAGGCACCAGAUCACAGGUACUGGGAGCUCCGCCACCAUAAGUAGAUGGCUCCGUUAGGGUUGUUUUUGCUACUCUGCUUCUGCUCUCACCUGUUUCGCUGCUCGCCCGAUCUCGCGCUGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU968664.1	ncRNA:19   CCGUCGCGCUCUAGCCCGC   1   |||=||||||||||*|||| targets:129   GGCGGCGCGAGAUCAGGCG   147 Target Full Sequence	2.5	Zea mays clone 323207 mRNA sequence	NA	coding protein	psRNATarget
BT068651.1	ncRNA:19   CCGUCGCGCUCUAGCCCGC   1   |||=||||||||||*|||| targets:190   GGCGGCGCGAGAUCAGGCG   208 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0354D19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176548.1	ncRNA:19   CCGUCGCGCUCUAGCCCGC   1   |||=||||||||||*|||| targets:190   GGCGGCGCGAGAUCAGGCG   208 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100383929), mRNA	NA	coding protein	psRNATarget
EZ516928.1	ncRNA:19   CCG-UCGCGCUCUAGCCCGC   1   |||-|*|||||||||||||| targets:178   GGCGAACGCGAGAUCGGGCG   197 Target Full Sequence	3.0	TSA: Zea mays cultivar W22 CL320Contig1.betc, mRNA sequence	NA	coding protein	psRNATarget