ncRNA ID | novel_zma_miR7898 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:198190042-198190140 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385575 |
Length | 20 |
Mature sequence(if miRNA) | 80 - UCUUCUACGUACAUCGCUUU - 99 |
Stem-loop(if miRNA) |
--    U       C       A   GAGCAACAGAGACAGAUAAGAUUA GGGAGAGAA   AGUG GUGUGUG AGAAGAG AUU                        C         C   |||| ||||||| ||||||| |||                        |   UCGC UACAUGC UCUUCUU UAA                        G         G UU    -       A       A   --------------------GAGA UGUCAGGAC |
Stem-loop sequence | AGUGUGUGUGUGCAGAAGAGAAUUGAGCAACAGAGACAGAUAAGAUUACGGGAGAGAACGCAGGACUGUGAGAGAAUAUUCUUCUACGUACAUCGCUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ051612.1 |
|
0.0 | TSA: Zea mays contig52732, mRNA sequence | NA | coding protein | psRNATarget |