Search result

BaseInfo

ncRNA ID	novel_zma_miR7894
Species	Zea mays
Class	miRNA
Genome position	Chr10:63053009-63053085 [-]
Reference genome	RefGen_v4
Source	SRR3385575
Length	23
Mature sequence(if miRNA)	55 - AAUUUCGGGUCGGGCUUUUCGGG - 77
Stem-loop(if miRNA)	--          -    CUU       UUUUAAUAUU      UU   AAUUUCGGGU CGGG   UUCGGGU          UCGGGU  C   |||||||||| ||||   |||||||          ||||||  U   UUAAAGCCCA GCUC   AAGCCCA          AGUCCA  A CU          A    ---       ----------      CG
Stem-loop sequence	AAUUUCGGGUCGGGCUUUUCGGGUUUUUAAUAUUUCGGGUUUCUAGCACCUGAACCCGAACUCGAACCCGAAAUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU944440.1	ncRNA:23   GGGCUUUUCGGGCUGGGCUUUAA   1   |||*||||*|||||||||||||| targets:633   CCCAAAAAACCCGACCCGAAAUU   655 Target Full Sequence	1.0	Zea mays clone 218592 mRNA sequence	NA	coding protein	psRNATarget
EU957014.1	ncRNA:23   GGGCUUUUCGGGCUGGGCUUUAA   1   |||*||||*|||||||||||||| targets:908   CCCAAAAAACCCGACCCGAAAUU   930 Target Full Sequence	1.0	Zea mays clone 1580507 glyoxalase/bleomycin resistance protein/dioxygenase mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154449.1	ncRNA:23   GGGCUUUUCGGGCUGGGCUUUAA   1   |||*||||*|||||||||||||| targets:908   CCCAAAAAACCCGACCCGAAAUU   930 Target Full Sequence	1.0	Zea mays glyoxalase/bleomycin resistance protein/dioxygenase (LOC100281531), mRNA	NA	coding protein	psRNATarget