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BaseInfo

ncRNA ID novel_zma_miR7891
Species Zea mays
Class miRNA
Genome position Chr4:32405389-32405475 [-]
Reference genome RefGen_v4
Source SRR3385575;SRR3385651
Length 19
Mature sequence(if miRNA) 69 - ACGUGGAUAUAGAGCUCUC - 87
Stem-loop(if miRNA) --     G     G      CA     GAUGGCU       ---   - A
  ACGUG AUAUA AGCUCU  GUGCA       GUGAAGU   GUC C U
  ||||| ||||| ||||||  |||||       |||||||   ||| |
  UGUAC UGUAU UCGAGA  UACGU       CACUUCA   CAG G C
CA     G     A      --     -------       AGA   U C
Stem-loop sequence ACGUGGAUAUAGAGCUCUCAGUGCAGAUGGCUGUGAAGUGUCCAUCCGUGACAGAACUUCACUGCAUAGAGCUAUAUGUGCAUGUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ051581.1
ncRNA:19   CUCUCGAGAUAUAGGUGCA   1
  |||||||||||||||||||
targets:247   GAGAGCUCUAUAUCCACGU   265

0.0 TSA: Zea mays contig52701, mRNA sequence NA coding protein psRNATarget
BT016208.1
ncRNA:19   CUCUCGAGAUAUAGGUGCA   1
  |||||||||||||||||||
targets:202   GAGAGCUCUAUAUCCACGU   220

0.0 Zea mays clone Contig41 mRNA sequence NA coding protein psRNATarget