Search result

BaseInfo

ncRNA ID	novel_zma_miR7883
Species	Zea mays
Class	miRNA
Genome position	Chr10:111867925-111868006 [-]
Reference genome	RefGen_v4
Source	SRR3385575;SRR3385651
Length	19
Mature sequence(if miRNA)	1 - CACUCGAGAGGAGGACAGA - 19
Stem-loop(if miRNA)	--  C   -     U C    --------UC    CAUAUGGCCAC   UG UCC CCUCU C AGUG          UGGU           C   || ||| ||||| | ||||          ||||           C   AC AGG GGAGA G UCAC          UCCG           A AG  -   A     - C    UCUUACGUGU    CUAUUUCCCGG
Stem-loop sequence	UGCUCCCCUCUUCCAGUGUCUGGUCAUAUGGCCACCCAGGCCCUUUAUCGCCUUGUGCAUUCUCACUCGAGAGGAGGACAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT068595.1	ncRNA:19   AGACAGGAGGAGAGCUC-AC   1   |||||||||||||||||-|| targets:638   UCUGUCCUCCUCUCGAGGUG   657 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0349B18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176533.1	ncRNA:19   AGACAGGAGGAGAGCUC-AC   1   |||||||||||||||||-|| targets:638   UCUGUCCUCCUCUCGAGGUG   657 Target Full Sequence	3.0	Zea mays uncharacterized LOC100383909 (LOC100383909), mRNA	NA	coding protein	psRNATarget
EU943662.1	ncRNA:19   AGACAGGAGGAGAGCUC-AC   1   |||||||||||||||||-|| targets:653   UCUGUCCUCCUCUCGAGGUG   672 Target Full Sequence	3.0	Zea mays clone 1674846 mRNA sequence	NA	coding protein	psRNATarget