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BaseInfo

ncRNA ID novel_zma_miR7881
Species Zea mays
Class miRNA
Genome position Chr3:215678909-215678962 [-]
Reference genome RefGen_v4
Source SRR3385575;SRR3385651
Length 23
Mature sequence(if miRNA) 32 - CGCAUGUCAGCUAUUGUCUCGUU - 54
Stem-loop(if miRNA) --      U     A   U      UUC
  CGCAUG CAGCU UUG CUCGUU   U
  |||||| ||||| ||| ||||||
  GCGUAC GUCGA AGC GAGCAA   A
UC      -     G   -      CGA
Stem-loop sequence CGCAUGUCAGCUAUUGUCUCGUUUUCUAAGCAACGAGCGAGAGCUGCAUGCGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ060987.1
ncRNA:23   UUGCUCUGUUAUCGACUGUACGC   1
  |||||||||||||||||||||||
targets:154   AACGAGACAAUAGCUGACAUGCG   176

0.0 TSA: Zea mays contig62109, mRNA sequence NA coding protein psRNATarget