ncRNA ID | novel_zma_miR7865 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:73224214-73224359 [-] |
Reference genome | RefGen_v4 |
Source | SRR3385575 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UACGAUGAUGAGUUGGACCCGC - 22 |
Stem-loop(if miRNA) |
--       C  G       ACGACAC     CACA    -AA   A  UUCA   G     ---    GA     CC   GGGUUCG CU AUCGUCG       GGAGG    GAGG   GGC UC    GUG GGGCC   GCGG  AUGGC  U   ||||||| || |||||||       |||||    ||||   ||| ||    ||| |||||   ||||  |||||  C   CCCAGGU GA UAGUAGC       CCUUC    CUCC   CCG AG    CGC CCCGG   CGCC  UACUG  G CG       U  G       AUCACGC     --AA    AAC   -  ----   A     CUA    AG     CA |
Stem-loop sequence | GGGUUCGCCUGAUCGUCGACGACACGGAGGCACAGAGGAAGGCAUCUUCAGUGGGGGCCGCGGGAAUGGCCCUCGACGUCAUGACCGCAUCGGCCCACGCGAGCCCAACCUCAACUUCCCGCACUACGAUGAUGAGUUGGACCCGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020542873.1 |
|
3.0 | PREDICTED: Zea mays hypothetical protein (LOC103635319), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008657803.2 |
|
3.0 | PREDICTED: Zea mays hypothetical protein (LOC103635319), transcript variant X1, mRNA | NA | coding protein | psRNATarget |