Search result

BaseInfo

ncRNA ID novel_zma_miR7854
Species Zea mays
Class miRNA
Genome position Chr2:172241610-172241674 [+]
Reference genome RefGen_v4
Source SRR3385575
Length 20
Mature sequence(if miRNA) 1 - CGCGAGCUCUGCACCCUACG - 20
Stem-loop(if miRNA) --C          -  C   A   U   G  - A
   GCGAGCUCUG CA CCU CGU UCG GC C G
   |||||||||| || ||| ||| ||| || |
   CGCUCGAGGC GU GGA GCA GGC CG G C
GCC          U  C   -   C   G  U A
Stem-loop sequence CGCGAGCUCUGCACCCUACGUUUCGGGCCAGCAGUGCGCGGCACGAGGCUGUCGGAGCUCGCCCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008679933.2
ncRNA:20   GCAUCCCACGUCUCGAGCGC   1
  |||*|*|||||||||||||*
targets:1970   CGUCGCGUGCAGAGCUCGCC   1989

3.0 PREDICTED: Zea mays long chain base biosynthesis protein 2a (LOC103652945), transcript variant X3, mRNA NA coding protein psRNATarget