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BaseInfo

ncRNA ID novel_zma_miR7851
Species Zea mays
Class miRNA
Genome position Chr2:101488230-101488277 [+]
Reference genome RefGen_v4
Source SRR3385575
Length 22
Mature sequence(if miRNA) 27 - GCAAGUAGAACAGAGCCACUCC - 48
Stem-loop(if miRNA) --  C     CA       C   G
  AG GGCUC  UUCUAUU UGC U
  || |||||  ||||||| ||| U
  UC CCGAG  AAGAUGA ACG U
CC  A     AC       -   G
Stem-loop sequence AGCGGCUCCAUUCUAUUCUGCGUUUGGCAAGUAGAACAGAGCCACUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008665421.2
ncRNA:22   CCUCACCGAGACAAGAUGAACG   1
  **||||*|||||||||||||||
targets:483   CUAGUGCCUCUGUUCUACUUGC   504

1.0 PREDICTED: Zea mays hypothetical protein (LOC100277566), mRNA NA coding protein psRNATarget
XM_020547643.1
ncRNA:22   CCUCACCGAGACAAGAUGAACG   1
  **||*||=|||||||||||||=
targets:501   CCAGAGGUUCUGUUCUACUUGU   522

3.0 PREDICTED: Zea mays uncharacterized LOC100279193 (LOC100279193), transcript variant X2, mRNA NA coding protein psRNATarget