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BaseInfo

ncRNA ID novel_zma_miR7835
Species Zea mays
Class miRNA
Genome position Chr9:90572422-90572474 [+]
Reference genome RefGen_v4
Source SRR3341905;SRR4237223
Length 22
Mature sequence(if miRNA) 1 - UGUAAUUCUAGCUGUUGAACGC - 22
Stem-loop(if miRNA) ----U U     U  C   UG  -C  AC
     G AAUUC AG UGU  AA  GC  U
     | ||||| || |||  ||  ||
     C UUAAG UC AUA  UU  CG  A
GCACU U     -  -   GU  AC  GU
Stem-loop sequence UGUAAUUCUAGCUGUUGAACGCACUAUGGCCAUUUGAUACUGAAUUUCUCACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ076485.1
ncRNA:22   CGCAAGUUGUCGAUCUUAAUGU   1
  ||||||||||||||||||||||
targets:89   GCGUUCAACAGCUAGAAUUACA   110

0.0 TSA: Zea mays contig12122, mRNA sequence NA coding protein psRNATarget