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BaseInfo

ncRNA ID	osa-miRf10378-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GAGGUGUCUAAGUUCAGCGC - NA
Stem-loop(if miRNA)	A       AUUU        A    -CACGUCA  U            -   -GC   U  G  --   G UCGUAUG CGCUGAA    GACACCUC GCGC        AC GGCGUUGAAUGC CGU   CAC GC GA  UAG A ||||||| |||||||    |||||||| ||||        || |||||||||||| |||   ||| || ||  ||| AGCAUAU GCGACUU    CUGUGGAG UGCG        UG UCGCGACUUACG GCA   GUG CG CU  GUC G        C       GAAU        C    AUUUAUCG  -            U   ACC   -  G  UA   G
Stem-loop sequence	UCGUAUGACGCUGAAAUUUGACACCUCAGCGCCACGUCAACUGGCGUUGAAUGCCGUGCCACUGCGGAUAGGAGGCUGAUUCGGCGUGCCAACGUGCAUUCAGCGCUGUGCUAUUUAGCGUCGAGGUGUCUAAGUUCAGCGCUAUACGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK242954.1	ncRNA:20   CGCGACUUGAAUCUGUGGAG   1   |||||||||||||||||||| targets:951   GCGCUGAACUUAGACACCUC   970 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090088P18, full insert sequence	NA	coding protein	psRNATarget
AK105004.2	ncRNA:20   CGCGACUUGAAUCUGUGGAG   1   ||||||||=||||||||||| targets:276   GCGCUGAAUUUAGACACCUC   295 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-006-B03, full insert sequence	NA	coding protein	psRNATarget
CT837884.1	ncRNA:20   CGCGACUUGAAUCUGUGGAG   1   |||||||||||||||||=|| targets:821   GCGCUGAACUUAGACACUUC   840 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA058P19, full insert sequence	NA	coding protein	psRNATarget
XM_015766258.1	ncRNA:20   CGCGACUUGAAUCUGUGGAG   1   ||||||||=||||||||||| targets:1101   GCGCUGAAUUUAGACACCUC   1120 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269164 (LOC9269164), mRNA	uncharacterized LOC9269164(LOC9269164)	coding protein	psRNATarget
XM_015770638.1	ncRNA:20   CGCGACUUGAAUCUGUGGAG   1   ||||||||||||||=||||| targets:394   GCGCUGAACUUAGAUACCUC   413 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X2, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
XM_015770637.1	ncRNA:20   CGCGACUUGAAUCUGUGGAG   1   ||||||||||||||=||||| targets:394   GCGCUGAACUUAGAUACCUC   413 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X1, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
AK241139.1	ncRNA:20   CGCGACUUGAAUCUGUGGAG   1   |||||||||||||||||=|| targets:816   GCGCUGAACUUAGACACUUC   835 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065099H13, full insert sequence	NA	coding protein	psRNATarget
XM_015761838.1	ncRNA:20   CGCGACUUGAAUCUGUGGAG   1   *|||||||=||||||||||| targets:3647   ACGCUGAAUUUAGACACCUC   3666 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350578 (LOC4350578), transcript variant X2, mRNA	uncharacterized LOC4350578(LOC4350578)	coding protein	psRNATarget
XM_015761837.1	ncRNA:20   CGCGACUUGAAUCUGUGGAG   1   *|||||||=||||||||||| targets:3650   ACGCUGAAUUUAGACACCUC   3669 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350578 (LOC4350578), transcript variant X1, mRNA	uncharacterized LOC4350578(LOC4350578)	coding protein	psRNATarget
XM_015788685.1	ncRNA:20   CGCGACUUGAAUCUGUGGAG   1   *||||*|||||||||||||| targets:1532   UCGCUAAACUUAGACACCUC   1551 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X1, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget
XM_015788686.1	ncRNA:20   CGCGACUUGAAUCUGUGGAG   1   *||||*|||||||||||||| targets:1650   UCGCUAAACUUAGACACCUC   1669 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X2, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget