Search result

BaseInfo

ncRNA ID	novel_zma_miR7801
Species	Zea mays
Class	miRNA
Genome position	Chr6:69069535-69069596 [-]
Reference genome	RefGen_v4
Source	SRR3341905
Length	24
Mature sequence(if miRNA)	1 - AUUUUACACUCGGCAAAGAACACU - 24
Stem-loop(if miRNA)	--C                ---CU  GACACU    GUUCUUUGCCGAGUGU     AG      C    ||||||||||||||||     ||      G    CAAGAAACGGCUCACA     UC      G UCA                UUUUA  GGAAAC
Stem-loop sequence	CGUUCUUUGCCGAGUGUCUAGGACACUCGGCAAAGGCUAUUUUACACUCGGCAAAGAACACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT035133.1	ncRNA:24   UCACAAGAAACGGCUCACAUUUUA   1   ***|*||||||||||||||*|||| targets:1295   UCGGCUCUUUGCCGAGUGUCAAAU   1318 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0041G19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138164.1	ncRNA:24   UCACAAGAAACGGCUCACAUUUUA   1   ***|*||||||||||||||*|||| targets:1295   UCGGCUCUUUGCCGAGUGUCAAAU   1318 Target Full Sequence	1.5	Zea mays OSIGBa0147B06.5 protein (LOC100192993), mRNA	NA	coding protein	psRNATarget
XM_008668897.2	ncRNA:24   UCACAAGAAACGGCUCACAUUUUA   1   ***|*||||||||||||||*|||| targets:1243   UCGGCUCUUUGCCGAGUGUCAAAU   1266 Target Full Sequence	1.5	PREDICTED: Zea mays OSIGBa0147B06.5 protein (LOC100192993), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547384.1	ncRNA:24   UCACAAGAAACGGCUCACAUUUUA   1   ***|*||||||||||||||*|||| targets:1256   UCGGCUCUUUGCCGAGUGUCAAAU   1279 Target Full Sequence	1.5	PREDICTED: Zea mays OSIGBa0147B06.5 protein (LOC100192993), transcript variant X1, mRNA	NA	coding protein	psRNATarget