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BaseInfo

ncRNA ID osa-miRf10377-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - UGCUAGAAGCUCCCCCAAACAGUC - NA
Stem-loop(if miRNA)        ----          -               C  C   U
GAAGGGC    CUGUUUGGGG AGCUUCUAGCAGCUG AG UUC C
|||||||    |||||||||| ||||||||||||||| || ||| C
UUUUUCG    GACAAACCCC UCGAAGAUCGUUGAC UC AAG U
       AUCU          C               -  U   A
Stem-loop sequence GAAGGGCCUGUUUGGGGAGCUUCUAGCAGCUGCAGCUUCUCCUAGAAUCUCAGUUGCUAGAAGCUCCCCCAAACAGUCUAGCUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK120042.1
ncRNA:24   CUGACAAACCCCCUCGAAGAUCGU   1
  ||||||||||||*|||||||||||
targets:438   GACUGUUUGGGGCAGCUUCUAGCA   461

1.5 Oryza sativa Japonica Group cDNA clone:002-188-E11, full insert sequence NA coding protein psRNATarget
AK063336.1
ncRNA:24   CUGACAAACCCCCUCGAAGAUCGU   1
  ||||||||||||*|||||||||||
targets:1673   GACUGUUUGGGGCAGCUUCUAGCA   1696

1.5 Oryza sativa Japonica Group cDNA clone:001-114-A07, full insert sequence NA coding protein psRNATarget
AK288425.1
ncRNA:24   CUGACAAACCCCCUCGAAGAUCGU   1
  ||||||||||||*|||||||||||
targets:1243   GACUGUUUGGGGCAGCUUCUAGCA   1266

1.5 Oryza sativa Japonica Group cDNA, clone: J090032K06, full insert sequence NA coding protein psRNATarget
XM_015783080.1
ncRNA:24   CUGACAAACCCCCUCGAAGAUCGU   1
  ||||||||||||*|||||||||||
targets:2290   GACUGUUUGGGGCAGCUUCUAGCA   2313

1.5 PREDICTED: Oryza sativa Japonica Group protein ZINC INDUCED FACILITATOR 1 (LOC4338249), mRNA protein ZINC INDUCED FACILITATOR 1(LOC4338249) coding protein psRNATarget