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BaseInfo

ncRNA ID novel_zma_miR7795
Species Zea mays
Class miRNA
Genome position Chr6:112527770-112527890 [-]
Reference genome RefGen_v4
Source SRR3341905
Length 24
Mature sequence(if miRNA) 98 - AUUUACGUAGGUAUUGUUGUGAGC - 121
Stem-loop(if miRNA) --A       A                A      C           C       AAGUCU
   UUUACGU GGUAUUGUUGUGAGCU UCGCAA GCACGGGUAAC GACUAGU      A
   ||||||| |||||||||||||||| |||||| ||||||||||| |||||||      U
   AAAUGCA CUAUAACAACACUCGG AGCGUU CGUGCUCGUUG CUGAUCA      A
AUC       C                A      A           U       GUAUAU
Stem-loop sequence AUUUACGUAGGUAUUGUUGUGAGCUAUCGCAACGCACGGGUAACCGACUAGUAAGUCUAUAUAUAUGACUAGUCUGUUGCUCGUGCAUUGCGAAGGCUCACAACAAUAUCCACGUAAACUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943720.1
ncRNA:24   CGAGUGUUGUUAUGGAUGCAUUUA   1
  |||=|||||||||=||||||||||
targets:909   GCUUACAACAAUAUCUACGUAAAU   932

1.5 Zea mays clone 1681864 mRNA sequence NA coding protein psRNATarget