ncRNA ID | novel_zma_miR7790 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:166177972-166178128 [+] |
Reference genome | RefGen_v4 |
Source | SRR3341905 |
Length | 20 |
Mature sequence(if miRNA) | 138 - UUGGUCAAACUUGAGAUGCU - 157 |
Stem-loop(if miRNA) |
--           G             -UAAUAAA    UAAC          A  ----------         UAU   AUUUU   CAUCUCAAGUU GACCAAAAUUAUA        ACAA    AUUUAUGAUA CA          UAUAAAUAU   UAG     U   ||||||||||| |||||||||||||        ||||    |||||||||| ||          |||||||||   |||   GUAGAGUUCAA CUGGUUUUAAUAU        UGUU    UAAAUACUGU GU          AUAUUUAUA   AUC     C UC           A             CUCUCUUA    --UC          A  UUAUCCGUAU         --U   AAUUA |
Stem-loop sequence | CAUCUCAAGUUGGACCAAAAUUAUAUAAUAAAACAAUAACAUUUAUGAUAACAUAUAAAUAUUAUUAGAUUUUUCAUUAACUAUAUAUUUAUAUAUGCCUAUUUGAUGUCAUAAAUCUUUGUAUUCUCUCUAUAAUUUUGGUCAAACUUGAGAUGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU972903.1 |
|
2.5 | Zea mays clone 389868 mRNA sequence | NA | coding protein | psRNATarget |