Search result

BaseInfo

ncRNA ID	novel_zma_miR7787
Species	Zea mays
Class	miRNA
Genome position	Chr6:142177815-142177853 [+]
Reference genome	RefGen_v4
Source	SRR3341905
Length	19
Mature sequence(if miRNA)	21 - GCACUAUGUGACGCUGACC - 39
Stem-loop(if miRNA)	--     A              UCAGC UCACAUAGUGCA   ||||| |||||||||||G   AGUCG AGUGUAUCACGU CC     C
Stem-loop sequence	UCAGCAUCACAUAGUGCAGUGCACUAUGUGACGCUGACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020542165.1	ncRNA:19   CCAGUCGCAGUGUAUCACG   1   ||||||||||||||=|||* targets:154   GGUCAGCGUCACAUGGUGG   172 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109941377 (LOC109941377), mRNA	NA	coding protein	psRNATarget
BT042012.1	ncRNA:19   CCAGUCGCAGUGUAUCACG   1   *||||||*||||||||||| targets:715   CGUCAGCAUCACAUAGUGC   733 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0107B01 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148295.1	ncRNA:19   CCAGUCGCAGUGUAUCACG   1   *||||||*||||||||||| targets:715   CGUCAGCAUCACAUAGUGC   733 Target Full Sequence	2.5	Zea mays Peptidase S24/S26A/S26B/S26C family protein (gpm882), mRNA	NA	coding protein	psRNATarget