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BaseInfo

ncRNA ID novel_zma_miR7783
Species Zea mays
Class miRNA
Genome position Chr6:106462163-106462244 [+]
Reference genome RefGen_v4
Source SRR3341905
Length 24
Mature sequence(if miRNA) 1 - AAAAACACUCGACAAAGAAACUCU - 24
Stem-loop(if miRNA) --         C            CUU           UUA
  AAAAACACU GACAAAGAAACU   UGUCGAGUGUU   U
  ||||||||| ||||||||||||   |||||||||||
  UUUUUGUGA CUGUUUUUUUGA   ACGGCUCACAG   U
AU         A            AAU           UUU
Stem-loop sequence AAAAACACUCGACAAAGAAACUCUUUGUCGAGUGUUUUAUUUUUGACACUCGGCAUAAAGUUUUUUUGUCAAGUGUUUUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT055423.1
ncRNA:24   UCUCAAAGAAACAGCUCACAAAAA   1
  |*|||||||||||||||||||||*
targets:82   AAAGUUUCUUUGUCGAGUGUUUUC   105

1.0 Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds NA coding protein psRNATarget
NM_001165647.1
ncRNA:24   UCUCAAAGAAACAGCUCACAAAAA   1
  |*|||||||||||||||||||||*
targets:82   AAAGUUUCUUUGUCGAGUGUUUUC   105

1.0 Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA NA coding protein psRNATarget
NM_001152461.1
ncRNA:24   UCUCAAAGAAACAGCUCACAAAAA   1
  |*|||||||||||||||||||||*
targets:2101   AAAGUUUCUUUGUCGAGUGUUUUC   2124

1.0 Zea mays uncharacterized LOC100279456 (IDP836), mRNA NA coding protein psRNATarget
BT054268.1
ncRNA:24   UCUCAAAGAAACAGCUCACAAAAA   1
  |*|||||||||||||||||||||*
targets:2101   AAAGUUUCUUUGUCGAGUGUUUUC   2124

1.0 Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds NA coding protein psRNATarget