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BaseInfo

ncRNA ID novel_zma_miR7766
Species Zea mays
Class miRNA
Genome position Chr10:24320328-24320409 [+]
Reference genome RefGen_v4
Source SRR3341905
Length 24
Mature sequence(if miRNA) 1 - AAAAACACUCGACAAAGAAACUCU - 24
Stem-loop(if miRNA) --           A                       - AA
  AAAAACACUCG CAAAGAAACUCUUUGCCGAGUGU C  A
  ||||||||||| ||||||||||||||||||||||| |  A
  UUUUUGUGAGC GUUUCUUUGAGAAAUGGCUCACA G  A
AU           C                       A AU
Stem-loop sequence AAAAACACUCGACAAAGAAACUCUUUGCCGAGUGUCAAAAAUAGAACACUCGGUAAAGAGUUUCUUUGCCGAGUGUUUUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT055423.1
ncRNA:24   UCUCAAAGAAACAGCUCACAAAAA   1
  |*|||||||||||||||||||||*
targets:82   AAAGUUUCUUUGUCGAGUGUUUUC   105

1.0 Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds NA coding protein psRNATarget
NM_001165647.1
ncRNA:24   UCUCAAAGAAACAGCUCACAAAAA   1
  |*|||||||||||||||||||||*
targets:82   AAAGUUUCUUUGUCGAGUGUUUUC   105

1.0 Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA NA coding protein psRNATarget
BT054268.1
ncRNA:24   UCUCAAAGAAACAGCUCACAAAAA   1
  |*|||||||||||||||||||||*
targets:2101   AAAGUUUCUUUGUCGAGUGUUUUC   2124

1.0 Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds NA coding protein psRNATarget
NM_001152461.1
ncRNA:24   UCUCAAAGAAACAGCUCACAAAAA   1
  |*|||||||||||||||||||||*
targets:2101   AAAGUUUCUUUGUCGAGUGUUUUC   2124

1.0 Zea mays uncharacterized LOC100279456 (IDP836), mRNA NA coding protein psRNATarget