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BaseInfo

ncRNA ID novel_zma_miR7758
Species Zea mays
Class miRNA
Genome position Chr4:171962692-171962808 [-]
Reference genome RefGen_v4
Source SRR3341905
Length 21
Mature sequence(if miRNA) 1 - AGAAACGUCGGUCGGGGGCCU - 21
Stem-loop(if miRNA) --                          G    C        -    -AGA  U     
  GCCCCCGACCGACGUUUCUGCCCAUC AUAC CCUCUCUA UCCC    UG UAUGGU
  |||||||||||||||||||||||||| |||| |||||||| ||||    || |||||C
  CGGGGGCUGGCUGCAAAGACGGGUAG UAUG GGAGAGGU AGGG    GC AUAUCG
UC                          G    U        U    AGUG  U     
Stem-loop sequence GCCCCCGACCGACGUUUCUGCCCAUCGAUACCCCUCUCUAUCCCAGAUGUUAUGGUCGCUAUAUCGGUGAGGGAUUGGAGAGGUGUAUGGAUGGGCAGAAACGUCGGUCGGGGGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008675666.1
ncRNA:21   UCCGGGGGCUGGCUGCAAAGA   1
  |||||=||||||||||||*||
targets:2019   AGGCCUCCGACCGACGUUCCU   2039

2.5 PREDICTED: Zea mays uncharacterized LOC103649971 (LOC103649971), mRNA NA coding protein psRNATarget