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BaseInfo

ncRNA ID novel_zma_miR7730
Species Zea mays
Class miRNA
Genome position Chr3:68368223-68368340 [+]
Reference genome RefGen_v4
Source SRR3341905
Length 24
Mature sequence(if miRNA) 95 - AUCAAUCCGGUAGAAACGAACAAG - 118
Stem-loop(if miRNA) --         UC         CAC     AUCG  UCACCUAAUCAAAGUUUAUAUAAAUC
  UGUUCGUUU  AUCGGAUUG   CCGGA    UU                          A
  |||||||||  |||||||||   |||||    ||
  ACAAGCAAA  UGGCCUAAC   AUCCA    GC                          G
GA         GA         --U     ----  UUUGCUAAGGAUUGGCCUAACUAAGA
Stem-loop sequence UGUUCGUUUUCAUCGGAUUGCACCCGGAAUCGUUUCACCUAAUCAAAGUUUAUAUAAAUCAGAGAAUCAAUCCGGUUAGGAAUCGUUUCGACCUAUCAAUCCGGUAGAAACGAACAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ238219.1
ncRNA:24   GAACAAGCAAAGAUGGCCUAACUA   1
  ||||||||||||||||||||||||
targets:15   CUUGUUCGUUUCUACCGGAUUGAU   38

0.0 Sequence 4214 from Patent EP2985353 NA coding protein psRNATarget
JB166550.1
ncRNA:24   GAACAAGCAAAGAUGGCCUAACUA   1
  ||||||||||||||||||||||||
targets:15   CUUGUUCGUUUCUACCGGAUUGAU   38

0.0 Sequence 4214 from Patent EP2559767 NA coding protein psRNATarget
HI406089.1
ncRNA:24   GAACAAGCAAAGAUGGCCUAACUA   1
  ||||||||||||||||||||||||
targets:15   CUUGUUCGUUUCUACCGGAUUGAU   38

0.0 Sequence 4214 from Patent EP2074227 NA coding protein psRNATarget
HI408868.1
ncRNA:24   GAACAAGCAAAGAUGGCCUAACUA   1
  ||||||||||||*|||||||||||
targets:7   CUUGUUCGUUUCCACCGGAUUGAU   30

1.5 Sequence 6993 from Patent EP2074227 NA coding protein psRNATarget
LQ240998.1
ncRNA:24   GAACAAGCAAAGAUGGCCUAACUA   1
  ||||||||||||*|||||||||||
targets:7   CUUGUUCGUUUCCACCGGAUUGAU   30

1.5 Sequence 6993 from Patent EP2985353 NA coding protein psRNATarget
JB169329.1
ncRNA:24   GAACAAGCAAAGAUGGCCUAACUA   1
  ||||||||||||*|||||||||||
targets:7   CUUGUUCGUUUCCACCGGAUUGAU   30

1.5 Sequence 6993 from Patent EP2559767 NA coding protein psRNATarget
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