ncRNA ID | ath-miRf10085-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - UACUCGAGCUCGUGGUCGAGU - NA |
Stem-loop(if miRNA) |
    -          G   G      --   -   G      -GG      - GU  -  -   -  - UUGUGGUUGAGUGGUGGAUAGA CAGC UACUCGACCA GGG UCGAGU  GGU GUU UGAAGU   GGAAGU C  CU AC UCG AC C                      A |||| |||||||||| ||| ||||||  ||| ||| ||||||   |||||| |  || || ||| || | GUUG AUGAGCUGGU CUC AGCUCA  UCA UAG ACUUCA   CCUUCA G  CC GU UUG AG U                      U     U          G   G      UG   G   G      AGG      U AG  G  G   G  A GUCGUUUAGUGAGCUGACGCUG |
Stem-loop sequence | CAGCUACUCGACCAGGGGGUCGAGUGGUGUUGUGAAGUGGGGAAGUCGUCUACUCGACCUUGUGGUUGAGUGGUGGAUAGAAUGUCGCAGUCGAGUGAUUUGCUGUAGAGGUUGUGGCCGAGUACUUCCGGAACUUCAGGAUGACUGUACUCGAGCUCGUGGUCGAGUAUGUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183042.1 |
|
1.5 | Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
NM_103391.1 |
|
2.5 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget |