Search result

BaseInfo

ncRNA ID novel_zma_miR7728
Species Zea mays
Class miRNA
Genome position Chr3:63018467-63018528 [+]
Reference genome RefGen_v4
Source SRR3341905
Length 24
Mature sequence(if miRNA) 39 - AUCCAGCGACAAGUAAAACGAAAC - 62
Stem-loop(if miRNA) --   U     G        U      U  A
  UUC UUUUA UUGUCGCU GAUAGU CA U
  ||| ||||| |||||||| |||||| ||
  AAG AAAAU AACAGCGA CUAUCA GU U
CA   C     G        C      C  U
Stem-loop sequence UUCUUUUUAGUUGUCGCUUGAUAGUUCAAUUUUGCACUAUCCAGCGACAAGUAAAACGAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242181.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:11   GUUUCGUUUUAGUUGUCGCUGGAU   34

1.5 Sequence 8176 from Patent EP2985353 NA coding protein psRNATarget
HI410051.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:11   GUUUCGUUUUAGUUGUCGCUGGAU   34

1.5 Sequence 8176 from Patent EP2074227 NA coding protein psRNATarget
JB170512.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:11   GUUUCGUUUUAGUUGUCGCUGGAU   34

1.5 Sequence 8176 from Patent EP2559767 NA coding protein psRNATarget
LQ241364.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:13   GUUUCGUUUUAGUUGUCGCUGGAU   36

1.5 Sequence 7359 from Patent EP2985353 NA coding protein psRNATarget
JB169695.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:13   GUUUCGUUUUAGUUGUCGCUGGAU   36

1.5 Sequence 7359 from Patent EP2559767 NA coding protein psRNATarget
HI409234.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:13   GUUUCGUUUUAGUUGUCGCUGGAU   36

1.5 Sequence 7359 from Patent EP2074227 NA coding protein psRNATarget
LQ239399.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5394 from Patent EP2985353 NA coding protein psRNATarget
JB167730.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5394 from Patent EP2559767 NA coding protein psRNATarget
HI407269.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5394 from Patent EP2074227 NA coding protein psRNATarget
LQ239341.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5336 from Patent EP2985353 NA coding protein psRNATarget
HI407324.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5449 from Patent EP2074227 NA coding protein psRNATarget
HI407211.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5336 from Patent EP2074227 NA coding protein psRNATarget
JB167785.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5449 from Patent EP2559767 NA coding protein psRNATarget
LQ239454.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5449 from Patent EP2985353 NA coding protein psRNATarget
JB167672.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5336 from Patent EP2559767 NA coding protein psRNATarget
JB167766.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
JB167691.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
HI407230.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
LQ239435.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
LQ239360.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
HI407305.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:16   GUUUCGUUUUAGUUGUCGCUGGAU   39

1.5 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
EZ065373.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:288   GUUUCGUUUUAGUUGUCGCUGGAU   311

1.5 TSA: Zea mays contig01006, mRNA sequence NA coding protein psRNATarget
BT062468.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:581   GUUUCGUUUUAGUUGUCGCUGGAU   604

1.5 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
NM_001153043.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:845   GUUUCGUUUUAGUUGUCGCUGGAU   868

1.5 Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA NA coding protein psRNATarget
BT055583.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:845   GUUUCGUUUUAGUUGUCGCUGGAU   868

1.5 Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds NA coding protein psRNATarget
EU968044.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:1034   GUUUCGUUUUAGUUGUCGCUGGAU   1057

1.5 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:922   GUUUCGUUUUAGUUGUCGCUGGAU   945

1.5 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
EU945792.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:1188   GUUUCGUUUUAGUUGUCGCUGGAU   1211

1.5 Zea mays clone 285684 mRNA sequence NA coding protein psRNATarget
EU971616.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:1172   GUUUCGUUUUAGUUGUCGCUGGAU   1195

1.5 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
EU964554.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:1337   GUUUCGUUUUAGUUGUCGCUGGAU   1360

1.5 Zea mays clone 279840 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_020549872.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:1275   GUUUCGUUUUAGUUGUCGCUGGAU   1298

1.5 PREDICTED: Zea mays uncharacterized LOC100382893 (LOC100382893), transcript variant X1, mRNA NA coding protein psRNATarget
BT065656.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:1442   GUUUCGUUUUAGUUGUCGCUGGAU   1465

1.5 Zea mays full-length cDNA clone ZM_BFc0005B18 mRNA, complete cds NA coding protein psRNATarget
NM_001175582.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:1442   GUUUCGUUUUAGUUGUCGCUGGAU   1465

1.5 Zea mays uncharacterized LOC100382893 (LOC100382893), mRNA NA coding protein psRNATarget
NM_001156357.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:1525   GUUUCGUUUUAGUUGUCGCUGGAU   1548

1.5 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:1525   GUUUCGUUUUAGUUGUCGCUGGAU   1548

1.5 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
NM_001158152.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:2123   GUUUCGUUUUAGUUGUCGCUGGAU   2146

1.5 Zea mays cyclin-like F-box (LOC100285258), mRNA NA coding protein psRNATarget
EU971439.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:2123   GUUUCGUUUUAGUUGUCGCUGGAU   2146

1.5 Zea mays clone 364738 cyclin-like F-box mRNA, complete cds NA coding protein psRNATarget
XM_020551485.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||||||||*||||||||||||
targets:2538   GUUUCGUUUUAGUUGUCGCUGGAU   2561

1.5 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
JB170144.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  ||||=||||||*||||||||||||
targets:6   GUUUUGUUUUAGUUGUCGCUGGAU   29

1.5 Sequence 7808 from Patent EP2559767 NA coding protein psRNATarget
HI409683.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  ||||=||||||*||||||||||||
targets:6   GUUUUGUUUUAGUUGUCGCUGGAU   29

1.5 Sequence 7808 from Patent EP2074227 NA coding protein psRNATarget
LQ241813.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  ||||=||||||*||||||||||||
targets:6   GUUUUGUUUUAGUUGUCGCUGGAU   29

1.5 Sequence 7808 from Patent EP2985353 NA coding protein psRNATarget
JB169555.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:11   GUUUCUUUUUAUUUGUCGCUGGAU   34

2.5 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
LQ241224.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:11   GUUUCUUUUUAUUUGUCGCUGGAU   34

2.5 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
HI409094.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:11   GUUUCUUUUUAUUUGUCGCUGGAU   34

2.5 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
JB169315.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:11   GUUUCUUUUUAUUUGUCGCUGGAU   34

2.5 Sequence 6979 from Patent EP2559767 NA coding protein psRNATarget
HI408854.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:11   GUUUCUUUUUAUUUGUCGCUGGAU   34

2.5 Sequence 6979 from Patent EP2074227 NA coding protein psRNATarget
LQ240984.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:11   GUUUCUUUUUAUUUGUCGCUGGAU   34

2.5 Sequence 6979 from Patent EP2985353 NA coding protein psRNATarget
LQ241745.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7740 from Patent EP2985353 NA coding protein psRNATarget
JB170076.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7740 from Patent EP2559767 NA coding protein psRNATarget
HI409615.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7740 from Patent EP2074227 NA coding protein psRNATarget
HI408710.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
LQ240840.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
LQ242326.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
JB170657.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
LQ241829.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
HI409616.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
LQ241458.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI410196.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
JB170077.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
JB169171.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
LQ241746.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
JB170160.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
HI409699.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
JB169789.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
HI408570.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
JB169031.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
LQ240700.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
HI409328.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
JB170060.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7724 from Patent EP2559767 NA coding protein psRNATarget
HI409599.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7724 from Patent EP2074227 NA coding protein psRNATarget
LQ241729.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:14   GUUUCUUUUUAUUUGUCGCUGGAU   37

2.5 Sequence 7724 from Patent EP2985353 NA coding protein psRNATarget
LQ235424.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:21   GUUUCUUUUUAUUUGUCGCUGGAU   44

2.5 Sequence 1419 from Patent EP2985353 NA coding protein psRNATarget
JB163755.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:21   GUUUCUUUUUAUUUGUCGCUGGAU   44

2.5 Sequence 1419 from Patent EP2559767 NA coding protein psRNATarget
HI403294.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:21   GUUUCUUUUUAUUUGUCGCUGGAU   44

2.5 Sequence 1419 from Patent EP2074227 NA coding protein psRNATarget
LQ235499.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:21   GUUUCUUUUUAUUUGUCGCUGGAU   44

2.5 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
HI403369.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:21   GUUUCUUUUUAUUUGUCGCUGGAU   44

2.5 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
JB163830.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:21   GUUUCUUUUUAUUUGUCGCUGGAU   44

2.5 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
EU957761.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  ||||=||||||*||||||||||||
targets:302   GUUUUGUUUUAGUUGUCGCUGGAU   325

1.5 Zea mays clone 1614826 mRNA sequence NA coding protein psRNATarget
BT060817.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:240   GUUUCUUUUUAUUUGUCGCUGGAU   263

2.5 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
BT068381.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1119   GUUUCUUUUUAUUUGUCGCUGGAU   1142

2.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1072   GUUUCUUUUUAUUUGUCGCUGGAU   1095

2.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
EU973028.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1178   GUUUCUUUUUAUUUGUCGCUGGAU   1201

2.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT088158.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1212   GUUUCUUUUUAUUUGUCGCUGGAU   1235

2.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1176   GUUUCUUUUUAUUUGUCGCUGGAU   1199

2.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:151   GUUUCUUUUUAUUUGUCGCUGGAU   174

2.5 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
XM_008656167.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1231   GUUUCUUUUUAUUUGUCGCUGGAU   1254

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1365   GUUUCUUUUUAUUUGUCGCUGGAU   1388

2.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1282   GUUUCUUUUUAUUUGUCGCUGGAU   1305

2.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001138729.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1412   GUUUCUUUUUAUUUGUCGCUGGAU   1435

2.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1412   GUUUCUUUUUAUUUGUCGCUGGAU   1435

2.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
XM_008656166.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1276   GUUUCUUUUUAUUUGUCGCUGGAU   1299

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1537   GUUUCUUUUUAUUUGUCGCUGGAU   1560

2.5 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1553   GUUUCUUUUUAUUUGUCGCUGGAU   1576

2.5 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
BT088136.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:782   GUUUCUUUUUAUUUGUCGCUGGAU   805

2.5 Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds NA coding protein psRNATarget
NM_001196908.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:782   GUUUCUUUUUAUUUGUCGCUGGAU   805

2.5 Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:2010   GUUUCUUUUUAUUUGUCGCUGGAU   2033

2.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:2506   GUUUCUUUUUAUUUGUCGCUGGAU   2529

2.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:2445   GUUUCUUUUUAUUUGUCGCUGGAU   2468

2.5 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:1473   GUUUCUUUUUAUUUGUCGCUGGAU   1496

2.5 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:2806   GUUUCUUUUUAUUUGUCGCUGGAU   2829

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:2823   GUUUCUUUUUAUUUGUCGCUGGAU   2846

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:2929   GUUUCUUUUUAUUUGUCGCUGGAU   2952

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||=||||||||||||
targets:3708   GUUUCUUUUUAUUUGUCGCUGGAU   3731

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
EZ061437.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  *||||*|||||=||||||||||||
targets:178   AUUUCUUUUUAUUUGUCGCUGGAU   201

2.5 TSA: Zea mays contig62559, mRNA sequence NA coding protein psRNATarget
JB163549.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:3   GUUUCUUUUUAGUUGUCGCUGGAU   26

2.5 Sequence 1213 from Patent EP2559767 NA coding protein psRNATarget
LQ235218.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:3   GUUUCUUUUUAGUUGUCGCUGGAU   26

2.5 Sequence 1213 from Patent EP2985353 NA coding protein psRNATarget
HI403088.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:3   GUUUCUUUUUAGUUGUCGCUGGAU   26

2.5 Sequence 1213 from Patent EP2074227 NA coding protein psRNATarget
HI406357.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:8   GUUUCUUUUUAGUUGUCGCUGGAU   31

2.5 Sequence 4482 from Patent EP2074227 NA coding protein psRNATarget
JB166818.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:8   GUUUCUUUUUAGUUGUCGCUGGAU   31

2.5 Sequence 4482 from Patent EP2559767 NA coding protein psRNATarget
LQ238487.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:8   GUUUCUUUUUAGUUGUCGCUGGAU   31

2.5 Sequence 4482 from Patent EP2985353 NA coding protein psRNATarget
JB167690.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:15   GUUUCUUUUUAGUUGUCGCUGGAU   38

2.5 Sequence 5354 from Patent EP2559767 NA coding protein psRNATarget
HI407229.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:15   GUUUCUUUUUAGUUGUCGCUGGAU   38

2.5 Sequence 5354 from Patent EP2074227 NA coding protein psRNATarget
LQ239359.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:15   GUUUCUUUUUAGUUGUCGCUGGAU   38

2.5 Sequence 5354 from Patent EP2985353 NA coding protein psRNATarget
HI403399.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:21   GUUUCUUUUUAGUUGUCGCUGGAU   44

2.5 Sequence 1524 from Patent EP2074227 NA coding protein psRNATarget
HI403287.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:21   GUUUCUUUUUAGUUGUCGCUGGAU   44

2.5 Sequence 1412 from Patent EP2074227 NA coding protein psRNATarget
JB163748.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:21   GUUUCUUUUUAGUUGUCGCUGGAU   44

2.5 Sequence 1412 from Patent EP2559767 NA coding protein psRNATarget
LQ235529.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:21   GUUUCUUUUUAGUUGUCGCUGGAU   44

2.5 Sequence 1524 from Patent EP2985353 NA coding protein psRNATarget
JB163860.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:21   GUUUCUUUUUAGUUGUCGCUGGAU   44

2.5 Sequence 1524 from Patent EP2559767 NA coding protein psRNATarget
LQ235417.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:21   GUUUCUUUUUAGUUGUCGCUGGAU   44

2.5 Sequence 1412 from Patent EP2985353 NA coding protein psRNATarget
EZ112557.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:58   GUUUCUUUUUAGUUGUCGCUGGAU   81

2.5 TSA: Zea mays contig48218, mRNA sequence NA coding protein psRNATarget
BT062074.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:1147   GUUUCUUUUUAGUUGUCGCUGGAU   1170

2.5 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
EU953599.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:1235   GUUUCUUUUUAGUUGUCGCUGGAU   1258

2.5 Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:1230   GUUUCUUUUUAGUUGUCGCUGGAU   1253

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:1245   GUUUCUUUUUAGUUGUCGCUGGAU   1268

2.5 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682289.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:1259   GUUUCUUUUUAGUUGUCGCUGGAU   1282

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
NM_001158647.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:1311   GUUUCUUUUUAGUUGUCGCUGGAU   1334

2.5 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:1313   GUUUCUUUUUAGUUGUCGCUGGAU   1336

2.5 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682282.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:1419   GUUUCUUUUUAGUUGUCGCUGGAU   1442

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008674191.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:1161   GUUUCUUUUUAGUUGUCGCUGGAU   1184

2.5 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553332.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:2008   GUUUCUUUUUAGUUGUCGCUGGAU   2031

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:2039   GUUUCUUUUUAGUUGUCGCUGGAU   2062

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_008677351.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:2067   GUUUCUUUUUAGUUGUCGCUGGAU   2090

2.5 PREDICTED: Zea mays hypothetical protein (LOC103651662), mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:2121   GUUUCUUUUUAGUUGUCGCUGGAU   2144

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553339.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:2152   GUUUCUUUUUAGUUGUCGCUGGAU   2175

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
NM_001352327.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:2679   GUUUCUUUUUAGUUGUCGCUGGAU   2702

2.5 Zea mays delta-1-pyrroline-5-carboxylate synthase-like (LOC103630430), mRNA NA coding protein psRNATarget
XM_008679695.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:267   GUUUCUUUUUAAUUGUCGCUGGAU   290

2.5 PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020537567.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:1462   GUUUCUUUUUAGUUGUCGCUGGAU   1485

2.5 PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020552423.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:266   GUUUCUUUUUAAUUGUCGCUGGAU   289

2.5 PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X5, mRNA NA coding protein psRNATarget
XM_008669143.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:2751   GUUUCUUUUUAAUUGUCGCUGGAU   2774

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X7, mRNA NA coding protein psRNATarget
XM_008669142.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:2681   GUUUCUUUUUAAUUGUCGCUGGAU   2704

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X8, mRNA NA coding protein psRNATarget
XM_008669138.2
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:2813   GUUUCUUUUUAAUUGUCGCUGGAU   2836

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020547479.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:3191   GUUUCUUUUUAAUUGUCGCUGGAU   3214

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020547478.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  |||||*|||||*||||||||||||
targets:3191   GUUUCUUUUUAAUUGUCGCUGGAU   3214

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X1, mRNA NA coding protein psRNATarget
EU944684.1
ncRNA:24   CAAAGCAAAAUGAACAGCGACCUA   1
  ||||=*|||||*||||||||||||
targets:711   GUUUUAUUUUAAUUGUCGCUGGAU   734

2.5 Zea mays clone 226132 mRNA sequence NA coding protein psRNATarget
© 2017 OPP-ncRBASE. All rights reserved.