ncRNA ID | novel_zma_miR7724 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:68158107-68158283 [-] |
Reference genome | RefGen_v4 |
Source | SRR3341905 |
Length | 22 |
Mature sequence(if miRNA) | 156 - AGCAUUGGGAUGGAUGAACACU - 177 |
Stem-loop(if miRNA) |
A   -     -A      A   ----    -UU   UGA       --     ---GU  A G    GA  AAC A      UU       --   AUA  GCA UUGGG  UGGAUG ACA    CUAG   GUU   AUGGGAA  GGAGG     GG C UGAU  AG   G CCCUGA  AAAAGGC  CGG   A  ||| |||||  |||||| |||    ||||   |||   |||||||  |||||     || | ||||  ||   | ||||||  |||||||  |||  CGU AACUU  AUUUAU UGU    GAUC   CAG   UACCCUU  CCUCC     CC G AUUA  UC   C GGGGCU  UUUUCCG  GUC   C -   C     AG      A   UCAA    UUU   --G       UA     GUUGU  - G    -G  --C -      -C       UU   AAU |
Stem-loop sequence | AGCAUUGGGAUGGAUGAACACUAGUUGUUUGAAUGGGAAGGAGGGUGGACGUGAUGAAGAACGACCCUGAUUAAAAGGCCGGAUAACUAACUGUUGCCUUUUCUCGGGGCCCUGAUUAGGCCUGUUGCCUCCAUUUCCCAUGGACUUUCUAGAACUUGUAUAUUUAGAUUCAACUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ053540.1 |
|
2.0 | TSA: Zea mays contig54662, mRNA sequence | NA | coding protein | psRNATarget |