ncRNA ID | novel_zma_miR7716 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:121725705-121725920 [+] |
Reference genome | RefGen_v4 |
Source | SRR3341905 |
Length | 22 |
Mature sequence(if miRNA) | 1 - GGAGGACUAAACAUGAGCUGAU - 22 |
Stem-loop(if miRNA) |
--        A       G         AAA      ACAUAA    ----UG            A    AUC    U   C           CU      A U     ACU   GGAGGACU AACAUGA CUGAUUAUA   CUAAUU      ACAG      GCUAAUUCGCGA ACAA   UAUU GGC UAAUUAGUCUA  AUUAGC C UGUUU   G   |||||||| ||||||| |||||||||   ||||||      ||||      |||||||||||| ||||   |||| ||| |||||||||||  |||||| | |||||   U   CCUCUUGA UUGUACU GAUUAAUAU   GAUUAA      UGUC      CGAUUAAGUGCU UGUU   AUAG UCG AUUAAUUAGAU  UAAUCG G ACAAA   A AU        C       A         CUC      ----CA    CAAAAA            C    -AA    U   U           AU      A U     ACG |
Stem-loop sequence | GGAGGACUAAACAUGAGCUGAUUAUAAAACUAAUUACAUAAACAGUGGCUAAUUCGCGAAACAAAUCUAUUUGGCCUAAUUAGUCUACUAUUAGCACUUGUUUACUGUAGCAAAACAUGAGCUAAUUAUAGAUUAAUUAUGCUUGAUAAAUUGUCUCGUGAAUUAGCAAAAACCUGUACAAUUAGCUCUAUAAUUAGAUCAUGUUCAGUUCUCCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU943345.1 |
|
2.5 | Zea mays clone 1604375 mRNA sequence | NA | coding protein | psRNATarget |