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BaseInfo

ncRNA ID novel_zma_miR7714
Species Zea mays
Class miRNA
Genome position Chr2:228466101-228466183 [+]
Reference genome RefGen_v4
Source SRR3341905
Length 21
Mature sequence(if miRNA) 1 - CACUAUAUGUAGAAACUUAAG - 21
Stem-loop(if miRNA) --      A       A    ---A    CCCACACA      CA
  CACUAU UGUAGAA CUUA    GUCU        UGAAAU  U
  |||||| ||||||| ||||    ||||        ||||||
  GUGAUA ACAUCUU GGAU    CAGA        ACUUUG  A
AC      C       A    CGAC    ----UAUA      AG
Stem-loop sequence CACUAUAUGUAGAAACUUAAGUCUCCCACACAUGAAAUCAUAGAGUUUCAAUAUAGACCAGCUAGGAUUCUACACAUAGUGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163681.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||||||||||||*||||||
targets:141   CUUAAGUUUCUACACAUAGUG   161

1.5 Sequence 1345 from Patent EP2559767 NA coding protein psRNATarget
LQ235350.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||||||||||||*||||||
targets:141   CUUAAGUUUCUACACAUAGUG   161

1.5 Sequence 1345 from Patent EP2985353 NA coding protein psRNATarget
HI403220.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||||||||||||*||||||
targets:141   CUUAAGUUUCUACACAUAGUG   161

1.5 Sequence 1345 from Patent EP2074227 NA coding protein psRNATarget
HI403222.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:141   CUUAGGUUUCUACACAUAGUG   161

2.5 Sequence 1347 from Patent EP2074227 NA coding protein psRNATarget
JB163683.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:141   CUUAGGUUUCUACACAUAGUG   161

2.5 Sequence 1347 from Patent EP2559767 NA coding protein psRNATarget
LQ235352.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:141   CUUAGGUUUCUACACAUAGUG   161

2.5 Sequence 1347 from Patent EP2985353 NA coding protein psRNATarget
HI402968.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:73   CUUAGGUUUCUACACAUAGUG   93

2.5 Sequence 1093 from Patent EP2074227 NA coding protein psRNATarget
HI403196.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:73   CUUAGGUUUCUACACAUAGUG   93

2.5 Sequence 1321 from Patent EP2074227 NA coding protein psRNATarget
LQ235098.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:73   CUUAGGUUUCUACACAUAGUG   93

2.5 Sequence 1093 from Patent EP2985353 NA coding protein psRNATarget
HI403200.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||||||*||
targets:73   CUUAGGUUUCUACAUAUAAUG   93

2.5 Sequence 1325 from Patent EP2074227 NA coding protein psRNATarget
LQ235326.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:73   CUUAGGUUUCUACACAUAGUG   93

2.5 Sequence 1321 from Patent EP2985353 NA coding protein psRNATarget
LQ235330.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||||||*||
targets:73   CUUAGGUUUCUACAUAUAAUG   93

2.5 Sequence 1325 from Patent EP2985353 NA coding protein psRNATarget
JB163657.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:73   CUUAGGUUUCUACACAUAGUG   93

2.5 Sequence 1321 from Patent EP2559767 NA coding protein psRNATarget
JB163661.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||||||*||
targets:73   CUUAGGUUUCUACAUAUAAUG   93

2.5 Sequence 1325 from Patent EP2559767 NA coding protein psRNATarget
JB163429.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:73   CUUAGGUUUCUACACAUAGUG   93

2.5 Sequence 1093 from Patent EP2559767 NA coding protein psRNATarget
LQ242225.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:70   CUUAGGUUUCUACACAUAGUG   90

2.5 Sequence 8220 from Patent EP2985353 NA coding protein psRNATarget
JB170556.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:70   CUUAGGUUUCUACACAUAGUG   90

2.5 Sequence 8220 from Patent EP2559767 NA coding protein psRNATarget
HI410095.1
ncRNA:21   GAAUUCAAAGAUGUAUAUCAC   1
  ||||=|||||||||*||||||
targets:70   CUUAGGUUUCUACACAUAGUG   90

2.5 Sequence 8220 from Patent EP2074227 NA coding protein psRNATarget
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