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BaseInfo

ncRNA ID	novel_zma_miR7701
Species	Zea mays
Class	miRNA
Genome position	Chr2:8141617-8141727 [-]
Reference genome	RefGen_v4
Source	SRR3341905
Length	24
Mature sequence(if miRNA)	88 - AAUCCGGUUAGGAAUCGUUCUGAC - 111
Stem-loop(if miRNA)	--AAUC                     C            C           AUU       CGGUUAGGAAUCGUUCUGACC ACCAAUCCGGCA AAACGAACAAG   U       ||||||||||||||||||||| |||||||||||| |||||||||||   G       GCCAAUCCUUAGCAAGGCUGG UGGUUAGGCCGU UUUGCUUGUUC   A CGUUAA                     A            C           CGG
Stem-loop sequence	AAUCCGGUUAGGAAUCGUUCUGACCCACCAAUCCGGCACAAACGAACAAGAUUUGAGGCCUUGUUCGUUUCUGCCGGAUUGGUAGGUCGGAACGAUUCCUAACCGAAUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020547654.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||||||||||||||||||||||| targets:4369   GUCAGAACGAUUCCUAACCGGAUU   4392 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100279517 (LOC100279517), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB166400.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:37   GUCGGAACGAUUCCUAACCGGAUU   60 Target Full Sequence	0.0	Sequence 4064 from Patent EP2559767	NA	coding protein	psRNATarget
HI405940.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:37   GUCGGAACGAUUCCUAACCGGAUU   60 Target Full Sequence	0.0	Sequence 4065 from Patent EP2074227	NA	coding protein	psRNATarget
HI405939.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:37   GUCGGAACGAUUCCUAACCGGAUU   60 Target Full Sequence	0.0	Sequence 4064 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238070.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:37   GUCGGAACGAUUCCUAACCGGAUU   60 Target Full Sequence	0.0	Sequence 4065 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238069.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:37   GUCGGAACGAUUCCUAACCGGAUU   60 Target Full Sequence	0.0	Sequence 4064 from Patent EP2985353	NA	coding protein	psRNATarget
JB166401.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:37   GUCGGAACGAUUCCUAACCGGAUU   60 Target Full Sequence	0.0	Sequence 4065 from Patent EP2559767	NA	coding protein	psRNATarget
NM_001138362.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:1448   GUCGGAACGAUUCCUAACCGGAUU   1471 Target Full Sequence	0.0	Zea mays Enhanced ethylene response protein 5 (LOC100193209), mRNA	NA	coding protein	psRNATarget
BT035415.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:1448   GUCGGAACGAUUCCUAACCGGAUU   1471 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0059N16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020549216.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:168   GUCGGAACGAUUCCUAACCGGAUU   191 Target Full Sequence	0.0	PREDICTED: Zea mays putative disease resistance protein RGA4 (LOC103649444), mRNA	NA	coding protein	psRNATarget
XM_008674095.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:2084   GUCGGAACGAUUCCUAACCGGAUU   2107 Target Full Sequence	0.0	PREDICTED: Zea mays putative MADS-box transcription factor family protein (MADS69), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020550140.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:3459   GUCGGAACGAUUCCUAACCGGAUU   3482 Target Full Sequence	0.0	PREDICTED: Zea mays rust resistance kinase Lr10 (LOC103649884), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008675573.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||||||| targets:3459   GUCGGAACGAUUCCUAACCGGAUU   3482 Target Full Sequence	0.0	PREDICTED: Zea mays rust resistance kinase Lr10 (LOC103649884), transcript variant X2, mRNA	NA	coding protein	psRNATarget
HI405951.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||=||||||| targets:37   GUCGGAACGAUUCCUAGCCGGAUU   60 Target Full Sequence	1.5	Sequence 4076 from Patent EP2074227	NA	coding protein	psRNATarget
HI405945.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||=||||||| targets:37   GUCGGAACGAUUCCUAGCCGGAUU   60 Target Full Sequence	1.5	Sequence 4070 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238081.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||=||||||| targets:37   GUCGGAACGAUUCCUAGCCGGAUU   60 Target Full Sequence	1.5	Sequence 4076 from Patent EP2985353	NA	coding protein	psRNATarget
JB166412.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||=||||||| targets:37   GUCGGAACGAUUCCUAGCCGGAUU   60 Target Full Sequence	1.5	Sequence 4076 from Patent EP2559767	NA	coding protein	psRNATarget
JB166406.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||=||||||| targets:37   GUCGGAACGAUUCCUAGCCGGAUU   60 Target Full Sequence	1.5	Sequence 4070 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238075.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||=||||||| targets:37   GUCGGAACGAUUCCUAGCCGGAUU   60 Target Full Sequence	1.5	Sequence 4070 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238062.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||=||||||||||| targets:40   GUCGGAACGAUUUCUAACCGGAUU   63 Target Full Sequence	1.5	Sequence 4057 from Patent EP2985353	NA	coding protein	psRNATarget
HI405932.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||=||||||||||| targets:40   GUCGGAACGAUUUCUAACCGGAUU   63 Target Full Sequence	1.5	Sequence 4057 from Patent EP2074227	NA	coding protein	psRNATarget
JB166393.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||=||||||||||| targets:40   GUCGGAACGAUUUCUAACCGGAUU   63 Target Full Sequence	1.5	Sequence 4057 from Patent EP2559767	NA	coding protein	psRNATarget
HI407238.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||=||||||||||| targets:41   GUCGGAACGAUUUCUAACCGGAUU   64 Target Full Sequence	1.5	Sequence 5363 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239368.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||=||||||||||| targets:41   GUCGGAACGAUUUCUAACCGGAUU   64 Target Full Sequence	1.5	Sequence 5363 from Patent EP2985353	NA	coding protein	psRNATarget
JB166391.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||=||||||||||| targets:41   GUCGGAACGAUUUCUAACCGGAUU   64 Target Full Sequence	1.5	Sequence 4055 from Patent EP2559767	NA	coding protein	psRNATarget
JB167699.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||=||||||||||| targets:41   GUCGGAACGAUUUCUAACCGGAUU   64 Target Full Sequence	1.5	Sequence 5363 from Patent EP2559767	NA	coding protein	psRNATarget
HI405930.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||=||||||||||| targets:41   GUCGGAACGAUUUCUAACCGGAUU   64 Target Full Sequence	1.5	Sequence 4055 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238060.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||=||||||||||| targets:41   GUCGGAACGAUUUCUAACCGGAUU   64 Target Full Sequence	1.5	Sequence 4055 from Patent EP2985353	NA	coding protein	psRNATarget
EZ517098.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||=|||||||||| targets:127   GUCGGAACGAUUCUUAACCGGAUU   150 Target Full Sequence	1.5	TSA: Zea mays cultivar W22 CL501Contig1.betc, mRNA sequence	NA	coding protein	psRNATarget
BT017671.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||=||||||| targets:899   GUCGGAACGAUUCCUAGCCGGAUU   922 Target Full Sequence	1.5	Zea mays clone EL01N0442B02.c mRNA sequence	NA	coding protein	psRNATarget
NM_001177010.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||=||||||||||| targets:1115   GUCGGAACGAUUUCUAACCGGAUU   1138 Target Full Sequence	1.5	Zea mays DRE-binding protein 4 (DBP4), mRNA	NA	coding protein	psRNATarget
FJ805752.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||=||||||||||| targets:1115   GUCGGAACGAUUUCUAACCGGAUU   1138 Target Full Sequence	1.5	Zea mays DRE-binding protein 4 (DBP4) mRNA, complete cds	NA	coding protein	psRNATarget
XM_008649755.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||=|||||||| targets:924   GUCGGAACGAUUCCUGACCGGAUU   947 Target Full Sequence	1.5	PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (cl16339_1), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020539029.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||=|||||||| targets:1041   GUCGGAACGAUUCCUGACCGGAUU   1064 Target Full Sequence	1.5	PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (cl16339_1), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB166358.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   ||==||||||||||||=||||||| targets:42   GUUGGAACGAUUCCUAGCCGGAUU   65 Target Full Sequence	1.5	Sequence 4022 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238027.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   ||==||||||||||||=||||||| targets:42   GUUGGAACGAUUCCUAGCCGGAUU   65 Target Full Sequence	1.5	Sequence 4022 from Patent EP2985353	NA	coding protein	psRNATarget
HI405897.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   ||==||||||||||||=||||||| targets:42   GUUGGAACGAUUCCUAGCCGGAUU   65 Target Full Sequence	1.5	Sequence 4022 from Patent EP2074227	NA	coding protein	psRNATarget
BT062764.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   ||||||||||||||||||||*||| targets:940   GUCAGAACGAUUCCUAACCGUAUU   963 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0343N04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174739.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   ||||||||||||||||||||*||| targets:940   GUCAGAACGAUUCCUAACCGUAUU   963 Target Full Sequence	1.5	Zea mays uncharacterized LOC100381966 (LOC100381966), mRNA	NA	coding protein	psRNATarget
EU948094.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   *||=|||||||||||||=|||||| targets:139   AUCGGAACGAUUCCUAAUCGGAUU   162 Target Full Sequence	1.5	Zea mays clone 369716 mRNA sequence	NA	coding protein	psRNATarget
BT035086.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   *||=|||||||||||||=|||||| targets:1197   AUCGGAACGAUUCCUAAUCGGAUU   1220 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0038G06 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138133.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   *||=|||||||||||||=|||||| targets:1418   AUCGGAACGAUUCCUAAUCGGAUU   1441 Target Full Sequence	1.5	Zea mays Phosphatidylinositol:ceramide inositolphosphotransferase 1 (LOC100192955), mRNA	NA	coding protein	psRNATarget
EU956107.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   *||=|||||||||||||=|||||| targets:1419   AUCGGAACGAUUCCUAAUCGGAUU   1442 Target Full Sequence	1.5	Zea mays clone 1557529 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
JB166397.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||*|||| targets:37   GUCGGAACGAUUCCUAACCAGAUU   60 Target Full Sequence	1.5	Sequence 4061 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238066.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||*|||| targets:37   GUCGGAACGAUUCCUAACCAGAUU   60 Target Full Sequence	1.5	Sequence 4061 from Patent EP2985353	NA	coding protein	psRNATarget
HI405936.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||*|||| targets:37   GUCGGAACGAUUCCUAACCAGAUU   60 Target Full Sequence	1.5	Sequence 4061 from Patent EP2074227	NA	coding protein	psRNATarget
HI405933.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||*|||| targets:40   GUCGGAACGAUUCCUAACCAGAUU   63 Target Full Sequence	1.5	Sequence 4058 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238063.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||*|||| targets:40   GUCGGAACGAUUCCUAACCAGAUU   63 Target Full Sequence	1.5	Sequence 4058 from Patent EP2985353	NA	coding protein	psRNATarget
JB166394.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||*|||| targets:40   GUCGGAACGAUUCCUAACCAGAUU   63 Target Full Sequence	1.5	Sequence 4058 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238078.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||*|||||||||| targets:37   GUCGGAACGAUUCGUAACCGGAUU   60 Target Full Sequence	1.5	Sequence 4073 from Patent EP2985353	NA	coding protein	psRNATarget
JB166409.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||*|||||||||| targets:37   GUCGGAACGAUUCGUAACCGGAUU   60 Target Full Sequence	1.5	Sequence 4073 from Patent EP2559767	NA	coding protein	psRNATarget
HI405948.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||*|||||||||| targets:37   GUCGGAACGAUUCGUAACCGGAUU   60 Target Full Sequence	1.5	Sequence 4073 from Patent EP2074227	NA	coding protein	psRNATarget
EZ109082.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=*||||||||||||||||||| targets:44   GUCGAAACGAUUCCUAACCGGAUU   67 Target Full Sequence	0.0	TSA: Zea mays contig44741, mRNA sequence	NA	coding protein	psRNATarget
EU965080.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||*||||||||| targets:1566   GUCGGAACGAUUCCAAACCGGAUU   1589 Target Full Sequence	1.5	Zea mays clone 283644 mRNA sequence	NA	coding protein	psRNATarget
NM_001156428.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||||||*||| targets:1479   GUCGGAACGAUUCCUAACCGAAUU   1502 Target Full Sequence	1.5	Zea mays agmatine deiminase (LOC100283528), mRNA	NA	coding protein	psRNATarget
EU965022.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||||||*||| targets:1479   GUCGGAACGAUUCCUAACCGAAUU   1502 Target Full Sequence	1.5	Zea mays clone 283266 agmatine deiminase mRNA, complete cds	NA	coding protein	psRNATarget
XM_008653755.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||*||||||| targets:359   GUCGGAACGAUUCCUACCCGGAUU   382 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103631908 (LOC103631908), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT054109.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||*|||| targets:2412   GUCGGAACGAUUCCUAACCUGAUU   2435 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0105H14 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152374.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||*|||| targets:2412   GUCGGAACGAUUCCUAACCUGAUU   2435 Target Full Sequence	1.5	Zea mays CRR4 (LOC100279357), mRNA	NA	coding protein	psRNATarget
XM_020541330.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||*||||||| targets:441   GUCGGAACGAUUCCUACCCGGAUU   464 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103631908 (LOC103631908), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008653754.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||*||||||| targets:623   GUCGGAACGAUUCCUACCCGGAUU   646 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103631908 (LOC103631908), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008654752.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=|||||||||||||||*|||| targets:2443   GUCGGAACGAUUCCUAACCAGAUU   2466 Target Full Sequence	1.5	PREDICTED: Zea mays putative cysteine-rich receptor-like protein kinase 35 (LOC103633070), mRNA	NA	coding protein	psRNATarget
XM_008653753.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||||||||*||||||| targets:825   GUCGGAACGAUUCCUACCCGGAUU   848 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103631908 (LOC103631908), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU942882.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||||*|||||=||||||| targets:101   GUCGGAACGAAUCCUAGCCGGAUU   124 Target Full Sequence	2.5	Zea mays clone 1543225 mRNA sequence	NA	coding protein	psRNATarget
EZ061700.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||=||||*=|||||||||||||| targets:118   GUCGGAACAGUUCCUAACCGGAUU   141 Target Full Sequence	2.0	TSA: Zea mays contig62822, mRNA sequence	NA	coding protein	psRNATarget
EU973085.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   **|=|||||=||||||=||||||| targets:959   CCCGGAACGGUUCCUAGCCGGAUU   982 Target Full Sequence	2.5	Zea mays clone 393049 DAG protein mRNA, complete cds	NA	coding protein	psRNATarget
HI408744.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |*|=||||||||||||*||||||| targets:40   GCCGGAACGAUUCCUAUCCGGAUU   63 Target Full Sequence	1.5	Sequence 6869 from Patent EP2074227	NA	coding protein	psRNATarget
JB169205.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |*|=||||||||||||*||||||| targets:40   GCCGGAACGAUUCCUAUCCGGAUU   63 Target Full Sequence	1.5	Sequence 6869 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240874.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |*|=||||||||||||*||||||| targets:40   GCCGGAACGAUUCCUAUCCGGAUU   63 Target Full Sequence	1.5	Sequence 6869 from Patent EP2985353	NA	coding protein	psRNATarget
BT017859.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||**||||||||||=|||||||| targets:963   GUCCUAACGAUUCCUGACCGGAUU   986 Target Full Sequence	1.5	Zea mays clone EL01N0511E01.c mRNA sequence	NA	coding protein	psRNATarget
XM_020551571.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||**||||||||||=|||||||| targets:1252   GUCCUAACGAUUCCUGACCGGAUU   1275 Target Full Sequence	1.5	PREDICTED: Zea mays protein recA (LOC100282426), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT062375.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||**||||||||||=|||||||| targets:1544   GUCCUAACGAUUCCUGACCGGAUU   1567 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0287P21 mRNA, complete cds	NA	coding protein	psRNATarget
BT085007.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||**||||||||||=|||||||| targets:1543   GUCCUAACGAUUCCUGACCGGAUU   1566 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0224O05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001352179.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||**||||||||||=|||||||| targets:1543   GUCCUAACGAUUCCUGACCGGAUU   1566 Target Full Sequence	1.5	Zea mays protein recA (LOC100282426), mRNA	NA	coding protein	psRNATarget
XM_008678176.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |||**||||||||||=|||||||| targets:1567   GUCCUAACGAUUCCUGACCGGAUU   1590 Target Full Sequence	1.5	PREDICTED: Zea mays protein recA (LOC100282426), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001175825.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |*|=||||||||||||*||||||| targets:1623   GCCGGAACGAUUCCUAUCCGGAUU   1646 Target Full Sequence	1.5	Zea mays putative DEAD-box ATP-dependent RNA helicase family protein (LOC100383160), mRNA	NA	coding protein	psRNATarget
BT066418.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   |*|=||||||||||||*||||||| targets:1623   GCCGGAACGAUUCCUAUCCGGAUU   1646 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0124A04 mRNA, complete cds	NA	coding protein	psRNATarget
BT083885.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   **|=*||||=|||||=|||||||| targets:1417   CCCGAAACGGUUCCUGACCGGAUU   1440 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0050N20 mRNA, complete cds	NA	coding protein	psRNATarget
BT088369.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   **|=*||||=|||||=|||||||| targets:1586   CCCGAAACGGUUCCUGACCGGAUU   1609 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0163B01 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008670116.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   **|=*||||=|||||=|||||||| targets:1542   CCCGAAACGGUUCCUGACCGGAUU   1565 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382341 (LOC100382341), transcript variant X4, mRNA	NA	coding protein	psRNATarget
NM_001175088.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   **|=*||||=|||||=|||||||| targets:1550   CCCGAAACGGUUCCUGACCGGAUU   1573 Target Full Sequence	2.5	Zea mays uncharacterized LOC100382341 (LOC100382341), mRNA	NA	coding protein	psRNATarget
BT063971.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   **|=*||||=|||||=|||||||| targets:1550   CCCGAAACGGUUCCUGACCGGAUU   1573 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0127H06 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008670113.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   **|=*||||=|||||=|||||||| targets:1626   CCCGAAACGGUUCCUGACCGGAUU   1649 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382341 (LOC100382341), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547850.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   **|=*||||=|||||=|||||||| targets:1707   CCCGAAACGGUUCCUGACCGGAUU   1730 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382341 (LOC100382341), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008670117.2	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   **|=*||||=|||||=|||||||| targets:1953   CCCGAAACGGUUCCUGACCGGAUU   1976 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382341 (LOC100382341), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020547849.1	ncRNA:24   CAGUCUUGCUAAGGAUUGGCCUAA   1   **|=*||||=|||||=|||||||| targets:2208   CCCGAAACGGUUCCUGACCGGAUU   2231 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382341 (LOC100382341), transcript variant X1, mRNA	NA	coding protein	psRNATarget