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BaseInfo

ncRNA ID osa-miRf10367-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UUUCGGUCCCUCAAGUUGUC - NA
Stem-loop(if miRNA)     A      G          UUC              ---------------AA   AUGUGACGGAUGUGUA
CUCG UGACAA UUGAGGGACC   GGUGUACUUUUUCC                 UGG                A
|||| |||||| ||||||||||   ||||||||||||||                 |||                A
GAGC GCUGUU AACUCCCUGG   UCACGUGGAAAAGG                 CCG                U
    G      G          CUU              AAAGAAUUUUUUUUAAU   GGUAAUGGCCAGAUCU
Stem-loop sequence CUCGAUGACAAGUUGAGGGACCUUCGGUGUACUUUUUCCAAUGGAUGUGACGGAUGUGUAAAUUCUAGACCGGUAAUGGGCCUAAUUUUUUUUAAGAAAGGAAAAGGUGCACUUUCGGUCCCUCAAGUUGUCGGCGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015775230.1
ncRNA:20   CUGUUGAACUCCCUGGCUUU   1
  |||||*||||||||||||||
targets:1255   GACAAAUUGAGGGACCGAAA   1274

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331473 (LOC4331473), transcript variant X2, mRNA uncharacterized LOC4331473(LOC4331473) coding protein psRNATarget
AK243575.1
ncRNA:20   CUGUUGAACUCCCUGGCUUU   1
  |||||*||||||||||||||
targets:1380   GACAAAUUGAGGGACCGAAA   1399

1.0 Oryza sativa Japonica Group cDNA, clone: J100082H15, full insert sequence NA coding protein psRNATarget
XM_015775229.1
ncRNA:20   CUGUUGAACUCCCUGGCUUU   1
  |||||*||||||||||||||
targets:1420   GACAAAUUGAGGGACCGAAA   1439

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331473 (LOC4331473), transcript variant X1, mRNA uncharacterized LOC4331473(LOC4331473) coding protein psRNATarget
AK111078.1
ncRNA:20   CUGUUGAACUCCCUGGCUUU   1
  |||||*|||||||||||||*
targets:759   GACAAGUUGAGGGACCGAAU   778

2.0 Oryza sativa Japonica Group cDNA clone:002-175-F01, full insert sequence NA coding protein psRNATarget
AK071464.1
ncRNA:20   CUGUUGAACUCCCUGGCUUU   1
  **||=|*|||||||||||||
targets:446   UUCAGCCUGAGGGACCGAAA   465

3.0 Oryza sativa Japonica Group cDNA clone:J023097O13, full insert sequence NA coding protein psRNATarget
XM_015765090.1
ncRNA:20   CUGUUGAACUCCCUGGCUUU   1
  **||=|*|||||||||||||
targets:465   UUCAGCCUGAGGGACCGAAA   484

3.0 PREDICTED: Oryza sativa Japonica Group NAC domain-containing protein 21/22 (LOC4352763), transcript variant X2, mRNA NAC domain-containing protein 21/22(LOC4352763) coding protein psRNATarget
XM_015765089.1
ncRNA:20   CUGUUGAACUCCCUGGCUUU   1
  **||=|*|||||||||||||
targets:465   UUCAGCCUGAGGGACCGAAA   484

3.0 PREDICTED: Oryza sativa Japonica Group NAC domain-containing protein 21/22 (LOC4352763), transcript variant X1, mRNA NAC domain-containing protein 21/22(LOC4352763) coding protein psRNATarget