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BaseInfo

ncRNA ID	novel_zma_miR7699
Species	Zea mays
Class	miRNA
Genome position	Chr1:164202447-164202550 [-]
Reference genome	RefGen_v4
Source	SRR3341905
Length	24
Mature sequence(if miRNA)	1 - UAUGUUGGAUUAUAUAAUCUGGGC - 24
Stem-loop(if miRNA)	--                             AUAAC      UUCAAA     UU   CCAGAUUAUAUAAUCCAACAUAUUUUGAA     ACUUAG      AUAUA  A   |||||||||||||||||||||||||||||     ||||||      |||||   GGUCUAAUAUAUUAGGUUGUAUAAAACUU     UGGGUC      UAUAU  G CG                             ---GA      ---UAA     UA
Stem-loop sequence	CCAGAUUAUAUAAUCCAACAUAUUUUGAAAUAACACUUAGUUCAAAAUAUAUUAGAUUAUAUAAUCUGGGUAGUUCAAAAUAUGUUGGAUUAUAUAAUCUGGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008664166.2	ncRNA:24   CGGGUCUAAUAUAUUAGGUUGUAU   1   *||||||||||||||||||||||| targets:1946   CCCCAGAUUAUAUAAUCCAACAUA   1969 Target Full Sequence	0.0	PREDICTED: Zea mays trigger factor-like protein TIG, Chloroplastic (LOC103640683), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008660268.2	ncRNA:24   CGGGUCUAAUAUAUUAGGUUGUAU   1   |==|=|||||||||||||||=||| targets:2868   GUUCGGAUUAUAUAAUCCAAUAUA   2891 Target Full Sequence	1.5	PREDICTED: Zea mays WW domain-containing protein (LOC100279861), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT055023.1	ncRNA:24   CGGGUCUAAUAUAUUAGGUUGUAU   1   |==|=|||||||||||||||=||| targets:3132   GUUCGGAUUAUAUAAUCCAAUAUA   3155 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0284I07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152814.1	ncRNA:24   CGGGUCUAAUAUAUUAGGUUGUAU   1   |==|=|||||||||||||||=||| targets:3132   GUUCGGAUUAUAUAAUCCAAUAUA   3155 Target Full Sequence	1.5	Zea mays WW domain-containing protein (LOC100279861), mRNA	NA	coding protein	psRNATarget
XM_008653731.2	ncRNA:24   CGGGUCUAAUAUAUUAGGUUGUAU   1   ||=|||||||||||||||||||*| targets:686   GCUCAGAUUAUAUAAUCCAACAAA   709 Target Full Sequence	1.5	PREDICTED: Zea mays Os07g0120600-like protein (LOC103631895), mRNA	NA	coding protein	psRNATarget
DQ245842.1	ncRNA:24   CGGGUCUAAUAUAUUAGGUUGUAU   1   ||=|||||||||||||||||||*| targets:609   GCUCAGAUUAUAUAAUCCAACAAA   632 Target Full Sequence	1.5	Zea mays clone 20787 mRNA sequence	NA	coding protein	psRNATarget