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BaseInfo

ncRNA ID	novel_zma_miR7692
Species	Zea mays
Class	miRNA
Genome position	Chr1:258889792-258889927 [-]
Reference genome	RefGen_v4
Source	SRR3341905;SRR5105959;SRR5105961
Length	24
Mature sequence(if miRNA)	1 - AUUGGAAAUAACCGAACAAGGCCU - 24
Stem-loop(if miRNA)	-   -           GC  U    C           AG       A  ---UGA     AAUCCCAAAC  GGU UUGUUCGGUUA  UC CAAU CAUGUGGAUUG  UGAGAUU GA      GUUUG          A  ||| |||||||||||  || |||| |||||||||||  ||||||| ||      |||||          A  CCG AACAAGCCAAU  AG GUUA GUGUACUUAAC  ACUCUAA CU      AUUUU          G U   G           AA  -    U           CU       -  UUUUUA     UCUUCAAAAU
Stem-loop sequence	GGUUUGUUCGGUUAGCUCUCAAUCCAUGUGGAUUGAGUGAGAUUAGAUGAGUUUGAAUCCCAAACAAGUAAAACUUCUUUUUAAUUUUUUCAAUCUCAUCCAAUUCAUGUGUAUUGGAAAUAACCGAACAAGGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008674377.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||||||||||||||||||||||| targets:3306   AGGCCUUGUUCGGUUAUUUCCAAU   3329 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008674376.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||||||||||||||||||||||| targets:3319   AGGCCUUGUUCGGUUAUUUCCAAU   3342 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674375.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||||||||||||||||||||||| targets:3350   AGGCCUUGUUCGGUUAUUUCCAAU   3373 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB163481.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1145 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235150.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1145 from Patent EP2985353	NA	coding protein	psRNATarget
HI403020.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1145 from Patent EP2074227	NA	coding protein	psRNATarget
HI403005.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1130 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235224.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1219 from Patent EP2985353	NA	coding protein	psRNATarget
HI403094.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1219 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235220.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1215 from Patent EP2985353	NA	coding protein	psRNATarget
JB163555.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1219 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235149.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1144 from Patent EP2985353	NA	coding protein	psRNATarget
JB163551.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1215 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235135.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1130 from Patent EP2985353	NA	coding protein	psRNATarget
JB163480.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1144 from Patent EP2559767	NA	coding protein	psRNATarget
JB163466.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1130 from Patent EP2559767	NA	coding protein	psRNATarget
HI403019.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1144 from Patent EP2074227	NA	coding protein	psRNATarget
HI403090.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:10   AGGCCUUGUUCGGUUAUUCCCAAU   33 Target Full Sequence	1.5	Sequence 1215 from Patent EP2074227	NA	coding protein	psRNATarget
EU942673.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||||||| targets:3   AGGGCUUGUUCGGUUAUUUCCAAU   26 Target Full Sequence	0.0	Zea mays clone 1529344 mRNA sequence	NA	coding protein	psRNATarget
EU942657.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:150   AGGCCUUGUUCGGUUAUUCCCAAU   173 Target Full Sequence	1.5	Zea mays clone 1527578 mRNA sequence	NA	coding protein	psRNATarget
NM_001147844.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||||||| targets:1036   AGGGCUUGUUCGGUUAUUUCCAAU   1059 Target Full Sequence	0.0	Zea mays Phytanoyl-CoA dioxygenase (LOC100273407), mRNA	NA	coding protein	psRNATarget
BT041052.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||||||| targets:1036   AGGGCUUGUUCGGUUAUUUCCAAU   1059 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0169K03 mRNA, complete cds	NA	coding protein	psRNATarget
EU949831.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:928   AGGCCUUGUUCGGUUAUUCCCAAU   951 Target Full Sequence	1.5	Zea mays clone 447574 mRNA sequence	NA	coding protein	psRNATarget
AY104167.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:1392   AGGCCUUGUUCGGUUAUUCCCAAU   1415 Target Full Sequence	1.5	Zea mays PCO062696 mRNA sequence	NA	coding protein	psRNATarget
BT043378.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:1378   AGGCCUUGUUCGGUUAUUCCCAAU   1401 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0174B12 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148918.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:1378   AGGCCUUGUUCGGUUAUUCCCAAU   1401 Target Full Sequence	1.5	Zea mays nodulation homolog 1 (znod1), mRNA	NA	coding protein	psRNATarget
BT066987.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||||||| targets:1327   AGGGCUUGUUCGGUUAUUUCCAAU   1350 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0138F03 mRNA, complete cds	NA	coding protein	psRNATarget
BT088232.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:1442   AGGCCUUGUUCGGUUAUUCCCAAU   1465 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0086F14 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001279968.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:1442   AGGCCUUGUUCGGUUAUUCCCAAU   1465 Target Full Sequence	1.5	Zea mays putative methyltransferase PMT15 (LOC101027245), mRNA	NA	coding protein	psRNATarget
XM_008679547.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:2412   AGGCCUUGUUCGGUUAUUCCCAAU   2435 Target Full Sequence	1.5	PREDICTED: Zea mays putative methyltransferase PMT15 (LOC101027245), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008666493.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:3395   AGGCCUUGUUCGGUUAUUCCCAAU   3418 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546709.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:3381   AGGCCUUGUUCGGUUAUUCCCAAU   3404 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008666491.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:3663   AGGCCUUGUUCGGUUAUUCCCAAU   3686 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008666492.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:3668   AGGCCUUGUUCGGUUAUUCCCAAU   3691 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008657579.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:7057   AGGCCUUGUUCGGUUAUUCCCAAU   7080 Target Full Sequence	1.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008657578.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:7161   AGGCCUUGUUCGGUUAUUCCCAAU   7184 Target Full Sequence	1.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020542399.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||||||||||*||||| targets:7172   AGGCCUUGUUCGGUUAUUCCCAAU   7195 Target Full Sequence	1.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EZ101759.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||=|||| targets:12   AGGGCUUGUUCGGUUAUUUUCAAU   35 Target Full Sequence	1.5	TSA: Zea mays contig37415, mRNA sequence	NA	coding protein	psRNATarget
EU951312.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||=|||| targets:298   AGGGCUUGUUCGGUUAUUUUCAAU   321 Target Full Sequence	1.5	Zea mays clone 695515 mRNA sequence	NA	coding protein	psRNATarget
AY104043.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||=|||| targets:838   AGGGCUUGUUCGGUUAUUUUCAAU   861 Target Full Sequence	1.5	Zea mays PCO145885 mRNA sequence	NA	coding protein	psRNATarget
BT068594.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||=|||| targets:835   AGGGCUUGUUCGGUUAUUUUCAAU   858 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0348O14 mRNA, complete cds	NA	coding protein	psRNATarget
EU972032.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||=|||| targets:865   AGGGCUUGUUCGGUUAUUUUCAAU   888 Target Full Sequence	1.5	Zea mays clone 373636 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151506.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||=|||| targets:865   AGGGCUUGUUCGGUUAUUUUCAAU   888 Target Full Sequence	1.5	Zea mays ER membrane protein complex subunit 7-like protein (pco145885(696)), mRNA	NA	coding protein	psRNATarget
BT061531.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||=|||| targets:758   AGGGCUUGUUCGGUUAUUUUCAAU   781 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0155L17 mRNA, complete cds	NA	coding protein	psRNATarget
BT018999.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||*||||||||||||||||=|||| targets:374   AGACCUUGUUCGGUUAUUUUCAAU   397 Target Full Sequence	1.5	Zea mays clone Contig487.F mRNA sequence	NA	coding protein	psRNATarget
BT037847.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||=|||| targets:1204   AGGGCUUGUUCGGUUAUUUUCAAU   1227 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0199C24 mRNA, complete cds	NA	coding protein	psRNATarget
BT068463.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||=|||| targets:1137   AGGGCUUGUUCGGUUAUUUUCAAU   1160 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0213N24 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154031.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||=|||||||*||||| targets:1727   AGGCCUUGUUUGGUUAUUCCCAAU   1750 Target Full Sequence	2.5	Zea mays uncharacterized LOC100281112 (LOC100281112), mRNA	NA	coding protein	psRNATarget
EU955633.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||||||||||=|||||||*||||| targets:1727   AGGCCUUGUUUGGUUAUUCCCAAU   1750 Target Full Sequence	2.5	Zea mays clone 1540038 transposon protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008680349.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||||||||||||||=|||| targets:1878   AGGGCUUGUUCGGUUAUUUUCAAU   1901 Target Full Sequence	1.5	PREDICTED: Zea mays peptidase/ serine-type peptidase (LOC100284377), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU967708.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*=||||||||||||||=|||| targets:1020   AGGGUUUGUUCGGUUAUUUUCAAU   1043 Target Full Sequence	1.5	Zea mays clone 305479 RER1A protein mRNA, complete cds	NA	coding protein	psRNATarget
DQ246079.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*=||||||||||||||=|||| targets:1061   AGGGUUUGUUCGGUUAUUUUCAAU   1084 Target Full Sequence	1.5	Zea mays clone 14671 mRNA sequence	NA	coding protein	psRNATarget
XM_008661229.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*=||||||||||||||=|||| targets:2650   AGGGUUUGUUCGGUUAUUUUCAAU   2673 Target Full Sequence	1.5	PREDICTED: Zea mays kanadaptin (LOC103638266), mRNA	NA	coding protein	psRNATarget
BT066874.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||=||||||=|||||||*||||| targets:1870   AGGUCUUGUUUGGUUAUUCCCAAU   1893 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0081D21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175969.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||=||||||=|||||||*||||| targets:1870   AGGUCUUGUUUGGUUAUUCCCAAU   1893 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383311 (LOC100383311), mRNA	NA	coding protein	psRNATarget
EZ100118.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:27   AGGGCUUGUUCGGUUAUUCCCAAU   50 Target Full Sequence	1.5	TSA: Zea mays contig35773, mRNA sequence	NA	coding protein	psRNATarget
HI405878.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:1   AGGGCUUGUUCGGUUAUUCCCAAU   24 Target Full Sequence	1.5	Sequence 4003 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238008.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:1   AGGGCUUGUUCGGUUAUUCCCAAU   24 Target Full Sequence	1.5	Sequence 4003 from Patent EP2985353	NA	coding protein	psRNATarget
JB166339.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:1   AGGGCUUGUUCGGUUAUUCCCAAU   24 Target Full Sequence	1.5	Sequence 4003 from Patent EP2559767	NA	coding protein	psRNATarget
EU949641.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:366   AGGGCUUGUUCGGUUAUUCCCAAU   389 Target Full Sequence	1.5	Zea mays clone 438540 mRNA sequence	NA	coding protein	psRNATarget
EZ064016.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:31   AGGGCUUGUUCGGUUAUUCCCAAU   54 Target Full Sequence	1.5	TSA: Zea mays contig65139, mRNA sequence	NA	coding protein	psRNATarget
EU942557.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:479   AGGGCUUGUUCGGUUAUUCCCAAU   502 Target Full Sequence	1.5	Zea mays clone 1517970 mRNA sequence	NA	coding protein	psRNATarget
EU951101.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:623   AGGGCUUGUUCGGUUAUUCCCAAU   646 Target Full Sequence	1.5	Zea mays clone 687881 mRNA sequence	NA	coding protein	psRNATarget
BT062183.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:158   AGGGCUUGUUCGGUUAUUCCCAAU   181 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0224O15 mRNA, complete cds	NA	coding protein	psRNATarget
AY103719.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:790   AGGGCUUGUUCGGUUAUUCCCAAU   813 Target Full Sequence	1.5	Zea mays PCO137008 mRNA sequence	NA	coding protein	psRNATarget
XM_008658927.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||||||||*||||||||*||||| targets:213   AGGCCUUGUCCGGUUAUUCCCAAU   236 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103636575 (LOC103636575), mRNA	NA	coding protein	psRNATarget
BT068797.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:1040   AGGGCUUGUUCGGUUAUUCCCAAU   1063 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0382L20 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176594.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:1040   AGGGCUUGUUCGGUUAUUCCCAAU   1063 Target Full Sequence	1.5	Zea mays uncharacterized LOC100383981 (LOC100383981), mRNA	NA	coding protein	psRNATarget
EU962956.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:1287   AGGACUUGUUCGGUUAUUCCCAAU   1310 Target Full Sequence	1.5	Zea mays clone 246872 mRNA sequence	NA	coding protein	psRNATarget
BT054550.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||||||*||||||||||*||||| targets:1692   AGGCCUUAUUCGGUUAUUCCCAAU   1715 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0152O03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152598.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||||||*||||||||||*||||| targets:1692   AGGCCUUAUUCGGUUAUUCCCAAU   1715 Target Full Sequence	2.5	Zea mays uncharacterized LOC100279601 (LOC100279601), mRNA	NA	coding protein	psRNATarget
XM_008659614.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:97   AGGGCUUGUUCGGUUAUUCCCAAU   120 Target Full Sequence	1.5	PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase A (LOC103637414), mRNA	NA	coding protein	psRNATarget
XM_008645912.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:1531   AGGGCUUGUUCGGUUAUUCCCAAU   1554 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100383981 (LOC100383981), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020553538.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:1798   AGGGCUUGUUCGGUUAUUCCCAAU   1821 Target Full Sequence	1.5	PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008645867.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:1864   AGGGCUUGUUCGGUUAUUCCCAAU   1887 Target Full Sequence	1.5	PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT018903.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:1941   AGGGCUUGUUCGGUUAUUCCCAAU   1964 Target Full Sequence	1.5	Zea mays clone EL01T0208C03.d mRNA sequence	NA	coding protein	psRNATarget
XM_020541449.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:2712   AGGGCUUGUUCGGUUAUUCCCAAU   2735 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541448.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:2816   AGGGCUUGUUCGGUUAUUCCCAAU   2839 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674024.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:3799   AGGGCUUGUUCGGUUAUUCCCAAU   3822 Target Full Sequence	1.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008674023.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:3813   AGGGCUUGUUCGGUUAUUCCCAAU   3836 Target Full Sequence	1.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674025.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:3931   AGGGCUUGUUCGGUUAUUCCCAAU   3954 Target Full Sequence	1.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008674021.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||| targets:3946   AGGGCUUGUUCGGUUAUUCCCAAU   3969 Target Full Sequence	1.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT035012.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||*|||||||||||=|||| targets:1517   AGGGCUUAUUCGGUUAUUUUCAAU   1540 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0031M23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138093.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||*|||||||||||=|||| targets:1517   AGGGCUUAUUCGGUUAUUUUCAAU   1540 Target Full Sequence	2.5	Zea mays uncharacterized LOC100192906 (LOC100192906), mRNA	NA	coding protein	psRNATarget
XM_008661718.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*=|||||||||||||*||||| targets:2124   AGGGUUUGUUCGGUUAUUCCCAAU   2147 Target Full Sequence	1.5	PREDICTED: Zea mays serine/arginine repetitive matrix protein 1 (LOC103638926), mRNA	NA	coding protein	psRNATarget
XM_008675786.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ***|=||||||||||||||||=|| targets:5498   CUACUUUGUUCGGUUAUUUCCGAU   5521 Target Full Sequence	1.5	PREDICTED: Zea mays protein GFS12 (LOC103650138), transcript variant X3, mRNA	NA	coding protein	psRNATarget
JB166302.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||* targets:1   AGGGCUUGUUCGGUUAUUCCCAAA   24 Target Full Sequence	2.5	Sequence 3966 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237971.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||* targets:1   AGGGCUUGUUCGGUUAUUCCCAAA   24 Target Full Sequence	2.5	Sequence 3966 from Patent EP2985353	NA	coding protein	psRNATarget
HI405841.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||* targets:1   AGGGCUUGUUCGGUUAUUCCCAAA   24 Target Full Sequence	2.5	Sequence 3966 from Patent EP2074227	NA	coding protein	psRNATarget
EU951448.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||* targets:657   AGGGCUUGUUCGGUUAUUCCCAAA   680 Target Full Sequence	2.5	Zea mays clone 701961 mRNA sequence	NA	coding protein	psRNATarget
XM_020552889.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||* targets:786   AGGGCUUGUUCGGUUAUUCCCAAA   809 Target Full Sequence	2.5	PREDICTED: Zea mays pre-mRNA-splicing factor CWC21-like (LOC103654764), transcript variant X5, mRNA	NA	coding protein	psRNATarget
BT069115.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||* targets:439   AGGGCUUGUUCGGUUAUUCCCAAA   462 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0186N21 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020549843.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||* targets:993   AGGGCUUGUUCGGUUAUUCCCAAA   1016 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020549841.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||* targets:1111   AGGGCUUGUUCGGUUAUUCCCAAA   1134 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549842.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*||||||||||||||*||||* targets:1111   AGGGCUUGUUCGGUUAUUCCCAAA   1134 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674901.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   *||*|||*|||||||||||=|||| targets:2007   CGGGCUUAUUCGGUUAUUUUCAAU   2030 Target Full Sequence	2.5	PREDICTED: Zea mays Sodium transporter HKT1 (HKT1), transcript variant X1, mRNA	NA	coding protein	psRNATarget
AY109258.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||*||||||||||||||*| targets:734   AGGGCUUAUUCGGUUAUUUCCAUU   757 Target Full Sequence	2.5	Zea mays PCO133529 mRNA sequence	NA	coding protein	psRNATarget
XM_020552750.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||*||||||||||*||||| targets:49   AGGGCUUAUUCGGUUAUUCCCAAU   72 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103654238 (LOC103654238), mRNA	NA	coding protein	psRNATarget
XM_008647691.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   |||*|||*||||||||||||||*| targets:1867   AGGGCUUAUUCGGUUAUUUCCAUU   1890 Target Full Sequence	2.5	PREDICTED: Zea mays la protein 1 (LOC103627401), mRNA	NA	coding protein	psRNATarget
XM_008658241.2	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   ||--||||||||||||||*||||| targets:1143   AG--CUUGUUCGGUUAUUCCCAAU   1164 Target Full Sequence	1.5	PREDICTED: Zea mays probable peptidyl-tRNA hydrolase 2 (LOC103635865), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ101889.1	ncRNA:24   UCCGGAACAAGCCAAUAAAGGUUA   1   *||*||||||||||||||*||||* targets:6   CGGGCUUGUUCGGUUAUUCCCAAA   29 Target Full Sequence	2.5	TSA: Zea mays contig37545, mRNA sequence	NA	coding protein	psRNATarget
LQ238007.1	ncRNA:22   CGGAACAAGCCAAUAAAGGUUA   1   |||||*||||||||||*||||| targets:1   GCCUUAUUCGGUUAUUCCCAAU   22 Target Full Sequence	2.5	Sequence 4002 from Patent EP2985353	NA	coding protein	psRNATarget
HI405877.1	ncRNA:22   CGGAACAAGCCAAUAAAGGUUA   1   |||||*||||||||||*||||| targets:1   GCCUUAUUCGGUUAUUCCCAAU   22 Target Full Sequence	2.5	Sequence 4002 from Patent EP2074227	NA	coding protein	psRNATarget
JB166338.1	ncRNA:22   CGGAACAAGCCAAUAAAGGUUA   1   |||||*||||||||||*||||| targets:1   GCCUUAUUCGGUUAUUCCCAAU   22 Target Full Sequence	2.5	Sequence 4002 from Patent EP2559767	NA	coding protein	psRNATarget