Search result

BaseInfo

ncRNA ID novel_zma_miR7691
Species Zea mays
Class miRNA
Genome position Chr1:272607395-272607481 [-]
Reference genome RefGen_v4
Source SRR3341905
Length 21
Mature sequence(if miRNA) 1 - AGAAAAGUCGAGCCGGCACCC - 21
Stem-loop(if miRNA) --                             A A    UACA   
  GUGCUGGCUCGACUUUUCUGGCAAGUCGG C ACUU    GUCG
  ||||||||||||||||||||||||||||| | ||||    |||U
  CACGGCCGAGCUGAAAAGACCGUUCAGCC G UGAA    CAGU
CC                             C C    ----   
Stem-loop sequence GUGCUGGCUCGACUUUUCUGGCAAGUCGGACAACUUUACAGUCGUUGACAAGUCGCCCGACUUGCCAGAAAAGUCGAGCCGGCACCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539265.1
ncRNA:21   CCCAC-GGCCGAGCUGAAAAGA   1
  |||*|-||||||||||||||||
targets:1717   GGGGGACCGGCUCGACUUUUCU   1738

3.0 PREDICTED: Zea mays kinesin-like protein KIN-UB (LOC100501407), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020539264.1
ncRNA:21   CCCAC-GGCCGAGCUGAAAAGA   1
  |||*|-||||||||||||||||
targets:1717   GGGGGACCGGCUCGACUUUUCU   1738

3.0 PREDICTED: Zea mays kinesin-like protein KIN-UB (LOC100501407), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008654757.2
ncRNA:21   CCCACGGCCGAGCUGAAAAGA   1
  |||*|||||||||||||*|||
targets:419   GGGAGCCGGCUCGACUUCUCU   439

2.5 PREDICTED: Zea mays EIN3-binding F-box protein 2-like (LOC103633077), mRNA NA coding protein psRNATarget