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BaseInfo

ncRNA ID	novel_zma_miR7678
Species	Zea mays
Class	miRNA
Genome position	Chr1:52871856-52872018 [+]
Reference genome	RefGen_v4
Source	SRR3341905
Length	21
Mature sequence(if miRNA)	143 - CUGUCGAGUGUGGGCUGAGCC - 163
Stem-loop(if miRNA)	-C     U      -     U   CAA   - -------  -      - A     AAA       U     UC  UC    AG  UGG   UUUAG CCCACA UCGGC AGC   GGG G       GC CGUGGG C GCUUA   GGGAGAG CCCAC  CU  CAUC  CC   C   ||||| |||||| ||||| |||   ||| |       || |||||| | |||||   ||||||| |||||  ||  ||||  ||   GAGUC GGGUGU AGCUG UCG   CCC C       CG GCACCC G CGGGU   UUCUCUC GGGUG  GA  GUAG  GG   U CC     -      G     -   AAG   G AAGUACG  A      A C     CGG       -     GU  GU    --  UUU
Stem-loop sequence	CUUUAGUCCCACAUCGGCUAGCCAAGGGGGCCGUGGGCAGCUUAAAAGGGAGAGUCCCACUCCUUCCAUCAGCCUGGCUUUUGGGAUGUGAGUGGUGGGCUCUCUUGGCUGGGCCGACCCACGAGCGCAUGAACGCCCGAAGCUGUCGAGUGUGGGCUGAGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008661940.2	ncRNA:21   CCGAGUCGGGUGUGAGCUGUC   1   |||*||||||||||||||||| targets:797   GGCCCAGCCCACACUCGACAG   817 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103639147 (LOC103639147), mRNA	NA	coding protein	psRNATarget
XM_008661940.2	ncRNA:21   CCGAGUCGGGUGUGAGCUGUC   1   |||*||||||||||||||||| targets:1608   GGCCCAGCCCACACUCGACAG   1628 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103639147 (LOC103639147), mRNA	NA	coding protein	psRNATarget
XM_008661940.2	ncRNA:21   CCGAGUCGGGUGUGAGCUGUC   1   ||=*||||||||||||||||| targets:1068   GGUCCAGCCCACACUCGACAG   1088 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103639147 (LOC103639147), mRNA	NA	coding protein	psRNATarget
XM_008661940.2	ncRNA:21   CCGAGUCGGGUGUGAGCUGUC   1   ||=*||||||||||||||||| targets:1338   GGUCCAGCCCACACUCGACAG   1358 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103639147 (LOC103639147), mRNA	NA	coding protein	psRNATarget