ncRNA ID | novel_zma_miR7676 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:80562497-80562605 [+] |
Reference genome | RefGen_v4 |
Source | SRR3341905 |
Length | 24 |
Mature sequence(if miRNA) | 86 - AUAUGACAAGUUAGACACUGAACU - 109 |
Stem-loop(if miRNA) |
--   -        AUG           ----------------AU           CG CUG   UUC GUGUCUAA   UGUCAUAUUUU                  CUAAGUUUAGU  U   A   ||| ||||||||   |||||||||||                  |||||||||||  |   A   AAG CACAGAUU   ACAGUAUAAAA                  GAUUCGAAUCA  A   U UC   U        -GA           AAAAAAUUGAAAAAAAAU           AU AUU |
Stem-loop sequence | UUCGUGUCUAAAUGUGUCAUAUUUUAUCUAAGUUUAGUCGUCUGAAUUUAAUAACUAAGCUUAGUAAAAAAAAGUUAAAAAAAAAAUAUGACAAGUUAGACACUGAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT062066.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFb0211I24 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001175121.1 |
|
3.0 | Zea mays UDP-glycosyltransferase 83A1 (LOC100382376), mRNA | NA | coding protein | psRNATarget | |||||||||
BT064093.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFc0137J11 mRNA, complete cds | NA | coding protein | psRNATarget |