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BaseInfo

ncRNA ID osa-miRf10364-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UUGUUAGGGUUCCGUCCAUU - NA
Stem-loop(if miRNA)                             G A       AUACA    UC
CCAUCGUUGUUAGGGUUCCGUCCAUUUU C CCGUUAA     CUAU  A
|||||||||||||||||||||||||||| | |||||||     ||||  U
GGUAGCGGCAAUUCCAAGGCAGGUAAGG G GGCAAUU     GAUA  C
                            - C       --CAA    UC
Stem-loop sequence CCAUCGUUGUUAGGGUUCCGUCCAUUUUGCACCGUUAAAUACACUAUUCAUCCUAUAGAACUUAACGGCGGGAAUGGACGGAACCUUAACGGCGAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015756802.1
ncRNA:20   UUACCUGCCUUGGGAUUGUU   1
  *|||||=|||||||||||||
targets:702   UAUGGAUGGAACCCUAACAA   721

1.0 PREDICTED: Oryza sativa Japonica Group protein ACCELERATED CELL DEATH 6 (LOC4346790), transcript variant X3, mRNA protein ACCELERATED CELL DEATH 6(LOC4346790) coding protein psRNATarget
AK064994.1
ncRNA:20   UUACCUGCCUUGGGAUUGUU   1
  *|||||=|||||||||||||
targets:1520   UAUGGAUGGAACCCUAACAA   1539

1.0 Oryza sativa Japonica Group cDNA clone:J013001D17, full insert sequence NA coding protein psRNATarget
AK064806.1
ncRNA:20   UUACCUGCCUUGGGAUUGUU   1
  *|||||=|||||||||||||
targets:1515   UAUGGAUGGAACCCUAACAA   1534

1.0 Oryza sativa Japonica Group cDNA clone:J013000D17, full insert sequence NA coding protein psRNATarget
XM_015756800.1
ncRNA:20   UUACCUGCCUUGGGAUUGUU   1
  *|||||=|||||||||||||
targets:1707   UAUGGAUGGAACCCUAACAA   1726

1.0 PREDICTED: Oryza sativa Japonica Group protein ACCELERATED CELL DEATH 6 (LOC4346790), transcript variant X1, mRNA protein ACCELERATED CELL DEATH 6(LOC4346790) coding protein psRNATarget
HI403849.1
ncRNA:20   UUACCUGCCUUGGGAUUGUU   1
  =||*||=|||||||||||||
targets:108   GAUAGAUGGAACCCUAACAA   127

2.0 Sequence 1974 from Patent EP2074227 NA coding protein psRNATarget
JB164310.1
ncRNA:20   UUACCUGCCUUGGGAUUGUU   1
  =||*||=|||||||||||||
targets:108   GAUAGAUGGAACCCUAACAA   127

2.0 Sequence 1974 from Patent EP2559767 NA coding protein psRNATarget
LQ235979.1
ncRNA:20   UUACCUGCCUUGGGAUUGUU   1
  =||*||=|||||||||||||
targets:108   GAUAGAUGGAACCCUAACAA   127

2.0 Sequence 1974 from Patent EP2985353 NA coding protein psRNATarget