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BaseInfo

ncRNA ID	novel_zma_miR7664
Species	Zea mays
Class	miRNA
Genome position	Chr9:9654422-9654497 [-]
Reference genome	RefGen_v4
Source	SRR3341856
Length	21
Mature sequence(if miRNA)	56 - UCACGGGAGGAUUGGAGAGGA - 76
Stem-loop(if miRNA)	--  A    A         A  A     A       UA   UC CGGG GGAUUGGAG GG UUGAG GGGAAAU  G   || |||| ||||||||| || ||||| |||||||   AG GCCC CCUAACCUC CC AACUC CCCUUUA  U CU  A    C         C  C     C       CU
Stem-loop sequence	UCACGGGAGGAUUGGAGAGGAUUGAGAGGGAAAUUAGUUCAUUUCCCCCUCAACCCCCUCCAAUCCCCCCGAGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238522.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   ||||||||=|||||||||||| targets:60   UCCUCUCCGAUCCUCCCGUGA   80 Target Full Sequence	1.5	Sequence 4517 from Patent EP2985353	NA	coding protein	psRNATarget
HI406392.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   ||||||||=|||||||||||| targets:60   UCCUCUCCGAUCCUCCCGUGA   80 Target Full Sequence	1.5	Sequence 4517 from Patent EP2074227	NA	coding protein	psRNATarget
JB166853.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   ||||||||=|||||||||||| targets:60   UCCUCUCCGAUCCUCCCGUGA   80 Target Full Sequence	1.5	Sequence 4517 from Patent EP2559767	NA	coding protein	psRNATarget
NM_001352049.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   ||||||||=|||||||||||| targets:559   UCCUCUCCGAUCCUCCCGUGA   579 Target Full Sequence	1.5	Zea mays uncharacterized LOC100284194 (pco105859), transcript variant 2, mRNA	NA	coding protein	psRNATarget
XM_020547779.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   ||||||||=|||||||||||| targets:587   UCCUCUCCGAUCCUCCCGUGA   607 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100284194 (pco105859), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547780.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   ||||||||=|||||||||||| targets:589   UCCUCUCCGAUCCUCCCGUGA   609 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100284194 (pco105859), transcript variant X2, mRNA	NA	coding protein	psRNATarget
JB163954.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*||||||||||||||||| targets:42   UCCCCUCCAAUCCUCCCGUGA   62 Target Full Sequence	1.0	Sequence 1618 from Patent EP2559767	NA	coding protein	psRNATarget
HI403493.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*||||||||||||||||| targets:42   UCCCCUCCAAUCCUCCCGUGA   62 Target Full Sequence	1.0	Sequence 1618 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235623.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*||||||||||||||||| targets:42   UCCCCUCCAAUCCUCCCGUGA   62 Target Full Sequence	1.0	Sequence 1618 from Patent EP2985353	NA	coding protein	psRNATarget
HI403355.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*||||||||||=|||||| targets:40   UCCCCUCCAAUCCUUCCGUGA   60 Target Full Sequence	2.5	Sequence 1480 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235485.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*||||||||||=|||||| targets:40   UCCCCUCCAAUCCUUCCGUGA   60 Target Full Sequence	2.5	Sequence 1480 from Patent EP2985353	NA	coding protein	psRNATarget
JB163816.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*||||||||||=|||||| targets:40   UCCCCUCCAAUCCUUCCGUGA   60 Target Full Sequence	2.5	Sequence 1480 from Patent EP2559767	NA	coding protein	psRNATarget
JB163761.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*=|||||||||||||||| targets:41   UCCCUUCCAAUCCUCCCGUGA   61 Target Full Sequence	2.0	Sequence 1425 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235557.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*=|||||||||||||||| targets:41   UCCCUUCCAAUCCUCCCGUGA   61 Target Full Sequence	2.0	Sequence 1552 from Patent EP2985353	NA	coding protein	psRNATarget
HI403427.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*=|||||||||||||||| targets:41   UCCCUUCCAAUCCUCCCGUGA   61 Target Full Sequence	2.0	Sequence 1552 from Patent EP2074227	NA	coding protein	psRNATarget
JB163888.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*=|||||||||||||||| targets:41   UCCCUUCCAAUCCUCCCGUGA   61 Target Full Sequence	2.0	Sequence 1552 from Patent EP2559767	NA	coding protein	psRNATarget
HI403300.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*=|||||||||||||||| targets:41   UCCCUUCCAAUCCUCCCGUGA   61 Target Full Sequence	2.0	Sequence 1425 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235430.1	ncRNA:21   AGGAGAGGUUAGGAGGGCACU   1   |||*=|||||||||||||||| targets:41   UCCCUUCCAAUCCUCCCGUGA   61 Target Full Sequence	2.0	Sequence 1425 from Patent EP2985353	NA	coding protein	psRNATarget