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BaseInfo

ncRNA ID novel_zma_miR7663
Species Zea mays
Class miRNA
Genome position Chr9:55240098-55240196 [-]
Reference genome RefGen_v4
Source SRR3341856
Length 24
Mature sequence(if miRNA) 76 - UAACAUUGUUUUGGUCAUUUGAGC - 99
Stem-loop(if miRNA) --                                            U  U
  UAACAUUGUUUUGGUCAUUUGAGCUUGUGGUAAAAGUUUGAGGC GU U
  |||||||||||||||||||||||||||||||||||||||||||| ||
  AUUGUAACAAAACCAGUAAACUCGAACACCAUUUUCAAACUCCG CA A
CC                                            -  U
Stem-loop sequence UAACAUUGUUUUGGUCAUUUGAGCUUGUGGUAAAAGUUUGAGGCUGUUUAUACGCCUCAAACUUUUACCACAAGCUCAAAUGACCAAAACAAUGUUACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ100536.1
ncRNA:24   CGAGUUUACUGGUUUUGUUACAAU   1
  |||||||||||||||||||*||||
targets:48   GCUCAAAUGACCAAAACAAGGUUA   71

1.5 TSA: Zea mays contig36191, mRNA sequence NA coding protein psRNATarget
EZ111241.1
ncRNA:24   CGAGUUUACUGGUUUUGUUACAAU   1
  |||=|||||||||||||||*||||
targets:228   GCUUAAAUGACCAAAACAAGGUUA   251

1.5 TSA: Zea mays contig46902, mRNA sequence NA coding protein psRNATarget
AY111244.1
ncRNA:24   CGAGUUUACUGGUUUUGUUACAAU   1
  *||*|||||*||||||*|||||||
targets:319   ACUAAAAUGUCCAAAAGAAUGUUA   342

2.5 Zea mays CL42094_1 mRNA sequence NA coding protein psRNATarget